Evidence map›Paper›PMID 16932970›Full record

ArticleHuman genetics2006

Pooled genome linkage scan of aggressive prostate cancer: results from the International Consortium for Prostate Cancer Genetics.

Daniel J Schaid, Shannon K McDonnell, Katherine E Zarfas, Julie M Cunningham, Scott Hebbring, Stephen N Thibodeau, Rosalind A Eeles, Douglas F Easton, William D Foulkes, Jacques Simard and 66 more

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Trial
  2. Genome-wide association study identifies a genetic variant associated with risk for more aggressive prostate cancer.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2011
    Trial
  3. Article
  4. Review
  5. ANO7 is associated with aggressive prostate cancer.International journal of cancer · 2018
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. The zinc finger transcription factor ZKSCAN3 promotes prostate cancer cell migration.The international journal of biochemistry & cell biology · 2012
    Article
  20. The role of BRCA1 and BRCA2 in prostate cancer.Asian journal of andrology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

76 authors.

Daniel J SchaidHarwick 7, Mayo Clinic College of Medicine, Rochester, MN 55905, USA. schaid@mayo.edu
Shannon K McDonnell
Katherine E Zarfas
Julie M Cunningham
Scott Hebbring
Stephen N Thibodeau
Rosalind A Eeles
Douglas F Easton
William D Foulkes
Jacques Simard
Graham G Giles
John L Hopper
Lovise Mahle
Pal Moller
Michael Badzioch
D Timothy Bishop
Chris Evans
Steve Edwards
Julia Meitz
Sarah Bullock
Questa Hope
Michelle Guy
Chih-lin Hsieh
Jerry Halpern
Raymond R Balise
Ingrid Oakley-Girvan
Alice S Whittemore
Jianfeng Xu
Latchezar Dimitrov
Bao-Li Chang
Tamara S Adams
Aubrey R Turner
Deborah A Meyers
Danielle M Friedrichsen
Kerry Deutsch
Suzanne Kolb
Marta Janer
Leroy Hood
Elaine A Ostrander
Janet L Stanford
Charles M Ewing
Marta Gielzak
Sarah D Isaacs
Patrick C Walsh
Kathleen E Wiley
William B Isaacs
Ethan M Lange
Lindsey A Ho
Jennifer L Beebe-Dimmer
David P Wood
Kathleen A Cooney
Daniela Seminara
Tarja Ikonen
Agnes Baffoe-Bonnie
Henna Fredriksson
Mika P Matikainen
Teuvo L J Tammela
Joan Bailey-Wilson
Johanna Schleutker
Christiane Maier
Kathleen Herkommer
Josef J Hoegel
Walther Vogel
Thomas Paiss
Fredrik Wiklund
Monica Emanuelsson
Elisabeth Stenman
Björn-Anders Jonsson
Henrik Grönberg
Nicola J Camp
James Farnham
Lisa A Cannon-Albright
William J Catalona
Brian K Suarez
Kimberly A Roehl
Investigators of the International Consortium for Prostate Cancer Genetics

Funding

TRANSGENIC MODELS FOR PROSTATE CANCER AND AUTOIMMUNITYP50CA058236 · NCI · JOHNS HOPKINS UNIVERSITY · PI NELSON, WILLIAM GEORGE · 1992 to 2020
$43.9M
Prostate Cancer Susceptibility: The ICPCG StudyU01CA089600 · NCI · MAYO CLINIC ROCHESTER · PI THIBODEAU, STEPHEN NORMAN · 2002 to 2016
$27.3M
Interdisciplinary Tranining in Cancer ResearchT32CA080416 · NCI · UNIVERSITY OF WASHINGTON · PI STODDARD, BARRY L. · 1998 to 2023
$9.7M
Finding Genes for Cancer Susceptibility and Growth RegulationZ01HG200325 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI OSTRANDER, ELAINE · 2005 to 2008
$7.3M
GENETIC EPIDEMIOLOGY OF PROSTATE CANCERR01CA080122 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 1999 to 2008
$3.8M
GENETIC ANALYSIS OF HEREDITARY PROSTATE CANCER FAMILIESR01CA079596 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COONEY, KATHLEEN A · 1999 to 2009
$3.0M
Mapping and Cloning Prostate Cancer Predisposition LociR01CA090752 · NCI · UNIVERSITY OF UTAH · PI ALBRIGHT, LISA CANNON · 2001 to 2004
$2.3M
LOCALIZATION OF SUSCEPTIBILITY LOCI IN PROSTATE CANCERR01CA072818 · NCI · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI THIBODEAU, STEPHEN NORMAN · 1997 to 2005
$1.9M
GENOTYPING FOR LOCATING HUMAN DISEASE GENESN01HG065403 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID L · 1996 to 2000
$1.7M
Genetic Epidemiology of CancerZ01HG200331 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BAILEY-WILSON, JOAN ELLEN · 2005 to 2008
$1.6M
Interaction of PTEN and CDKN1B in Pca susceptibilityR01CA106523 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI XU, JIANFENG · 2004 to 2008
$1.6M
RESEARCH IN CANCER EPIDEMIOLOGY AND BIOSTATISTICSR01CA067044 · NCI · STANFORD UNIVERSITY · PI WHITTEMORE, ALICE · 1995 to 2008
$1.5M
Medical Research Council G0501019NCI NIH HHS CA079596NCI NIH HHS CA080122NCI NIH HHS CA106523-01A1NCI NIH HHS CA58236NCI NIH HHS CA67044NCI NIH HHS CA72818NCI NIH HHS CA89600NCI NIH HHS CA95052-01NCI NIH HHS K07 CA98364NCI NIH HHS R01 CA90752NCI NIH HHS T32 CA080416NCRR NIH HHS N01 RR00064NHGRI NIH HHS N01 HG65403
6 · The paper itself

Abstract

While it is widely appreciated that prostate cancers vary substantially in their propensity to progress to a life-threatening stage, the molecular events responsible for this progression have not been identified. Understanding these molecular mechanisms could provide important prognostic information relevant to more effective clinical management of this heterogeneous cancer. Hence, through genetic linkage analyses, we examined the hypothesis that the tendency to develop aggressive prostate cancer may have an important genetic component. Starting with 1,233 familial prostate cancer families with genome scan data available from the International Consortium for Prostate Cancer Genetics, we selected those that had at least three members with the phenotype of clinically aggressive prostate cancer, as defined by either high tumor grade and/or stage, resulting in 166 pedigrees (13%). Genome-wide linkage data were then pooled to perform a combined linkage analysis for these families. Linkage signals reaching a suggestive level of significance were found on chromosomes 6p22.3 (LOD = 3.0), 11q14.1-14.3 (LOD = 2.4), and 20p11.21-q11.21 (LOD = 2.5). For chromosome 11, stronger evidence of linkage (LOD = 3.3) was observed among pedigrees with an average at diagnosis of 65 years or younger. Other chromosomes that showed evidence for heterogeneity in linkage across strata were chromosome 7, with the strongest linkage signal among pedigrees without male-to-male disease transmission (7q21.11, LOD = 4.1), and chromosome 21, with the strongest linkage signal among pedigrees that had African American ancestry (21q22.13-22.3; LOD = 3.2). Our findings suggest several regions that may contain genes which, when mutated, predispose men to develop a more aggressive prostate cancer phenotype. This provides a basis for attempts to identify these genes, with potential clinical utility for men with aggressive prostate cancer and their relatives.

Indexed as

Genetic LinkageGenome, HumanAgedBlack or African AmericanChromosome MappingFamily HealthFemaleGenetic HeterogeneityGenetic Predisposition to DiseaseGenotypeHumansInternational CooperationLod ScoreMaleMicrosatellite RepeatsMiddle Aged

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.