Evidence map›Paper›PMID 16932943›Full record

ArticleJournal of cancer research and clinical oncology2007

Infrequent mutation of ATBF1 in human breast cancer.

Xiaodong Sun, Yingfa Zhou, Kristen B Otto, Mingrong Wang, Ceshi Chen, Wei Zhou, Krithika Subramanian, Paula M Vertino, Jin-Tang Dong

Open access · greenAbstract read
In one paragraph

Article in Journal of cancer research and clinical oncology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Xiaodong SunDepartment of Hematology and Oncology, Winship Cancer Institute, Emory University School of Medicine, Atlanta, GA 30322, USA.
Yingfa Zhou
Kristen B Otto
Mingrong Wang
Ceshi Chen
Wei Zhou
Krithika Subramanian
Paula M Vertino
Jin-Tang Dong
Emory University · USChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

MOLECULAR DISSECTION OF 13Q14 IN PROSTATE CANCERR01CA085560 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI DONG, JIN-TANG · 2000 to 2010
$2.5M
NCI NIH HHS CA85560NCI NIH HHS R01 CA085560
6 · The paper itself

Abstract

Deletion at chromosome 16q is frequent in prostate and breast cancers, suggesting the existence of one or more tumor suppressor genes in 16q. Recently, the transcription factor ATBF1 at 16q22 was identified as a strong candidate tumor suppressor gene in prostate cancer, and loss of ATBF1 expression was associated with poorer prognosis in breast cancer. In the present study, we examined mutation, expression, and promoter methylation of ATBF1 in 32 breast cancer cell lines. Only 2 of the 32 cancer cell lines had mutations, although 18 nucleotide polymorphisms were detected. In addition, 24 of 32 (75%) cancer cell lines had reduced ATBF1 mRNA levels, yet promoter methylation was not involved in gene silencing. These findings suggest that ATBF1 plays a role in breast cancer through transcriptional downregulation rather than mutations.

Indexed as

Down-RegulationTranscription, GeneticBreast NeoplasmsFemaleHomeodomain ProteinsHumansMutationPolymorphism, GeneticRNA, MessengerTumor Cells, CulturedHomeodomain ProteinsRNA, MessengerZFHX3 protein, human

Identifiers

PMID16932943
PMCPMC12160847
OpenAlexW2016520582

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.