Evidence map›Paper›PMID 16928744›Full record

ArticleJournal of virology2006

Heterogeneity and temporal dynamics of evolution of G1 human rotaviruses in a settled population.

Serenella Arista, Giovanni M Giammanco, Simona De Grazia, Stefania Ramirez, Concetta Lo Biundo, Claudia Colomba, Antonio Cascio, Vito Martella

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 135 citations in OpenAlex.

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  13. The Rotavirus Vaccine Landscape, an Update.Pathogens (Basel, Switzerland) · 2021
    Review
  14. Article
  15. Article
  16. Whole GenomeVaccines · 2020
    Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Serenella AristaDipartimento di Igiene e Microbiologia, via del Vespro 133, 90127, Palermo, Italy. arista@unipa.it
Giovanni M Giammanco
Simona De Grazia
Stefania Ramirez
Concetta Lo Biundo
Claudia Colomba
Antonio Cascio
Vito Martella
University of Palermo · ITUniversity of Bari Aldo Moro · ITUniversity of Messina · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A rotavirus sample collection from 19 consecutive years was used to investigate the heterogeneity and the dynamics of evolution of G1 rotavirus strains in a geographically defined population. Phylogenetic analysis of the VP7 gene sequences of G1P[8] human rotavirus strains showed the circulation of a heterogeneous population comprising three lineages and seven sublineages. Increases in the circulation of G1 rotaviruses were apparently associated with the introduction of novel G1 strains that exhibited multiple amino acid changes in antigenic regions involved in rotavirus neutralization compared to the strains circulating in the previous years. The emergence and/or introduction of G1 antigenic variants might be responsible for the continuous circulation of G1 rotaviruses in the local population, with the various lineages and sublineages appearing, disappearing, or cocirculating in an alternate fashion under the influence of immune-pressure mechanisms. Sequence analysis of VP4-encoding genes of the G1 strains revealed that the older strains were associated with a unique VP4 lineage, while a novel VP4 lineage emerged after 1995. The introduction of human rotavirus vaccines might alter the forces and balances that drive rotavirus evolution and determine the spread of novel strains that are antigenically different from those included in the vaccine formulations. The continuous emergence of VP7-VP4 gene combinations in human rotavirus strains should be taken into consideration when devising vaccination strategies.

Indexed as

Evolution, MolecularAmino Acid SequenceAntigens, ViralCapsid ProteinsChild, PreschoolGenes, ViralHumansInfantItalyLongitudinal StudiesMolecular Sequence DataPhylogenyRNA-Binding ProteinsRotavirusRotavirus InfectionsSequence Homology, Amino AcidAntigens, ViralCapsid ProteinsNS35 protein, rotavirusRNA-Binding ProteinsViral Nonstructural ProteinsVP4 protein, RotavirusVP7 protein, Rotavirus

Identifiers

PMID16928744
PMCPMC1641777
OpenAlexW2172251715

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.