ReviewNature biotechnology2006
How does DNA sequence motif discovery work?
Review in Nature biotechnology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
41 citing papers in PubMed.
- Benchmarking transcription factor binding site prediction models: a comparative analysis on synthetic and biological data.Briefings in bioinformatics · 2025Article
- BIOMAPP::CHIP: large-scale motif analysis.BMC bioinformatics · 2024Article
- A survey on algorithms to characterize transcription factor binding sites.Briefings in bioinformatics · 2023Review
- Article
- Machine learning: A powerful tool for gene function prediction in plants.Applications in plant sciences · 2020Review
- Reads Binning Improves Alignment-Free Metagenome Comparison.Frontiers in genetics · 2019Article
- SamSelect: a sample sequence selection algorithm for quorum planted motif search on large DNA datasets.BMC bioinformatics · 2018Article
- DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data.BMC bioinformatics · 2018Article
- A systematic approach to RNA-associated motif discovery.BMC genomics · 2018Article
- Revealing Subtle Functional Subgroups in Class A Scavenger Receptors by Pattern Discovery and Disentanglement of Aligned Pattern Clusters.Proteomes · 2018Article
- Sequence motif finder using memetic algorithm.BMC bioinformatics · 2018Article
- ssHMM: extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data.Nucleic acids research · 2017Article
- Inherent limitations of probabilistic models for protein-DNA binding specificity.PLoS computational biology · 2017Article
- RefSelect: a reference sequence selection algorithm for planted (l, d) motif search.BMC bioinformatics · 2016Article
- Reconstruction of novel transcription factor regulons through inference of their binding sites.BMC bioinformatics · 2015Article
- From System-Wide Differential Gene Expression to Perturbed Regulatory Factors: A Combinatorial Approach.PloS one · 2015Article
- Evolutionary Dynamics of GLD-1-mRNA complexes in Caenorhabditis nematodes.Genome biology and evolution · 2014Article
- DMINDA: an integrated web server for DNA motif identification and analyses.Nucleic acids research · 2014Article
- Characterization and identification of cis-regulatory elements in Arabidopsis based on single-nucleotide polymorphism information.Plant physiology · 2014Article
- Global O-GlcNAc Levels Modulate Transcription of the Adipocyte Secretome during Chronic Insulin Resistance.Frontiers in endocrinology · 2014Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
1 author.
Funding
No grant is acknowledged in the PubMed record.
Abstract
PubMed holds no abstract for this paper.
Indexed as
Identifiers
16900144What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.