Evidence map›Paper›PMID 16897478›Full record

ArticlePlant molecular biology2006

Targeted Ds-tagging strategy generates high allelic diversity at the Arabidopsis HY2 locus.

Audrey Creff, Bénédicte Léonard, Thierry Desnos

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Article in Plant molecular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Audrey CreffDSV/DEVM Laboratoire de Biologie du Développement des Plantes, Bât. 178, UMR6191, CEA/CNRS/Université Aix-Marseille II, F-13108, Saint-Paul-lez-Durance, Cedex, France.
Bénédicte Léonard
Thierry Desnos

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The targeted (or directed) tagging is a strategy aimed to mobilize a tranposon into a specific gene (target). Only a very few Arabidopsis genes have been tagged by this way, thus the efficiency of the strategy, as well as the diversity of the alleles obtained are not well documented. We have used a maize Ds element in a directed tagging of HY2. The starting Ds element, located 22 kb proximal to HY2, has been remobilized in a cross with an Ac transposase source line. From the F2 progeny of 4800 F1 we phenotypically isolated seven hy2 mutants. Molecular analysis of these alleles revealed that two contained a Ds element in HY2 and were instable, three have a large deletion that partially or completely removed HY2, one has a footprint in a HY2 exon and one leaky allele consisted of a 22 kb inversion upstream the HY2 coding sequence. Thus, the transposon-based directed tagging strategy generates a wide diversity of tagged and non-tagged alleles that can be used to generate allelic series or deletion of clustered genes.

Indexed as

AllelesArabidopsisArabidopsis ProteinsBase SequenceDNA Transposable ElementsFlowersGene Expression Regulation, PlantGenes, PlantGenetic VariationPhenotypeTime FactorsZea maysArabidopsis ProteinsDNA Transposable Elements

Identifiers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.