ReviewMicrobial ecology2006
Microarray applications in microbial ecology research.
Review in Microbial ecology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
29 citing papers in PubMed.
- From soil to sequences: mechanisms and tools unravelling plant-rhizomicrobiome interactions.World journal of microbiology & biotechnology · 2026Review
- Acid Mine Drainage as Habitats for Distinct Microbiomes: Current Knowledge in the Era of Molecular and Omic Technologies.Current microbiology · 2020Review
- A Retrospective Review of Microbiological Methods Applied in Studies Following the Deepwater Horizon Oil Spill.Frontiers in microbiology · 2018Review
- Molecular Techniques for the Detection of Organisms in Aquatic Environments, with Emphasis on Harmful Algal Bloom Species.Sensors (Basel, Switzerland) · 2017Review
- A Metagenomic Analysis of Bacterial Microbiota in the Digestive Tract of Triatomines.Bioinformatics and biology insights · 2017Article
- Development and validation of a custom microarray for global transcriptome profiling of the fungus Aspergillus nidulans.Current genetics · 2016Article
- Molecular tools for the selective detection of nine diatom species biomarkers of various water quality levels.International journal of environmental research and public health · 2015Article
- Methodological issues in the study of intestinal microbiota in irritable bowel syndrome.World journal of gastroenterology · 2014Review
- The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family level.PloS one · 2013Article
- Principal methods for isolation and identification of soil microbial communities.Folia microbiologica · 2013Article
- Recent advances and future perspectives in microbial phototrophy in antarctic sea ice.Biology · 2012Article
- Use of functional gene arrays for elucidating in situ biodegradation.Frontiers in microbiology · 2012Article
- Monitoring of microbial hydrocarbon remediation in the soil.3 Biotech · 2011Article
- Microbial communities and functional genes associated with soil arsenic contamination and the rhizosphere of the arsenic-hyperaccumulating plant Pteris vittata L.Applied and environmental microbiology · 2010Article
- High-throughput microarray technology in diagnostics of enterobacteria based on genome-wide probe selection and regression analysis.BMC genomics · 2010Article
- Development of a common oligonucleotide reference standard for microarray data normalization and comparison across different microbial communities.Applied and environmental microbiology · 2010Article
- DNA chip analysis in diverse organisms with unsequenced genomes.Molecular biotechnology · 2010Article
- Dynamic of active microorganisms inhabiting a bioleaching industrial heap of low-grade copper sulfide ore monitored by real-time PCR and oligonucleotide prokaryotic acidophile microarray.Microbial biotechnology · 2009Article
- Afforestation alters the composition of functional genes in soil and biogeochemical processes in South American grasslands.Applied and environmental microbiology · 2009Article
- Characterization of the Zoarces viviparus liver transcriptome using massively parallel pyrosequencing.BMC genomics · 2009Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Microarray technology has the unparalleled potential to simultaneously determine the dynamics and/or activities of most, if not all, of the microbial populations in complex environments such as soils and sediments. Researchers have developed several types of arrays that characterize the microbial populations in these samples based on their phylogenetic relatedness or functional genomic content. Several recent studies have used these microarrays to investigate ecological issues; however, most have only analyzed a limited number of samples with relatively few experiments utilizing the full high-throughput potential of microarray analysis. This is due in part to the unique analytical challenges that these samples present with regard to sensitivity, specificity, quantitation, and data analysis. This review discusses specific applications of microarrays to microbial ecology research along with some of the latest studies addressing the difficulties encountered during analysis of complex microbial communities within environmental samples. With continued development, microarray technology may ultimately achieve its potential for comprehensive, high-throughput characterization of microbial populations in near real time.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.