Evidence map›Paper›PMID 16896711›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2006

Development of simple sequence repeat markers specific for the Lr34 resistance region of wheat using sequence information from rice and Aegilops tauschii.

Eligio Bossolini, Simon G Krattinger, Beat Keller

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Article
  2. Genomic analysis of two all-stage stripe rust resistance genes in the Vavilov wheat landrace AGG40807WHEA1.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  4. Breaking the association between gametocidal gene(s) and leaf rust resistance gene (Molecular breeding : new strategies in plant improvement · 2024
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  5. Article
  6. Fighting wheat powdery mildew: from genes to fields.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Review
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  9. Article
  10. Article
  11. Article
  12. Chromosomal genomics facilitates fine mapping of a Russian wheat aphid resistance gene.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
    Article
  13. Article
  14. Fine mapping of LrSV2, a race-specific adult plant leaf rust resistance gene on wheat chromosome 3BS.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014
    Article
  15. Article
  16. Article
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  18. Article
  19. Article
  20. Identification of adult plant resistance to stripe rust in the wheat cultivar Cappelle-Desprez.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Eligio BossoliniInstitute of Plant Biology, University of Zürich, Zollikerstrasse 107, 8008 Zürich, Switzerland.
Simon G Krattinger
Beat Keller

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hexaploid wheat (Triticum aestivum L.) originated about 8,000 years ago from the hybridization of tetraploid wheat with diploid Aegilops tauschii Coss. containing the D-genome. Thus, the bread wheat D-genome is evolutionary young and shows a low degree of polymorphism in the bread wheat gene pool. To increase marker density around the durable leaf rust resistance gene Lr34 located on chromosome 7DS, we used molecular information from the orthologous region in rice. Wheat expressed sequence tags (wESTs) were identified by homology with the rice genes in the interval of interest, but were monomorphic in the 'Arina' x 'Forno' mapping population. To derive new polymorphic markers, bacterial artificial chromosome (BAC) clones representing a total physical size of approximately 1 Mb and belonging to four contigs were isolated from Ae. tauschii by hybridization screening with wheat ESTs. Several BAC clones were low-pass sequenced, resulting in a total of approximately 560 kb of sequence. Ten microsatellite sequences were found, and three of them were polymorphic in our population and were genetically mapped close to Lr34. Comparative analysis of marker order revealed a large inversion between the rice genome and the wheat D-genome. The SWM10 microsatellite is closely linked to Lr34 and has the same allele in the three independent sources of Lr34: 'Frontana', 'Chinese Spring', and 'Forno', as well in most of the genotypes containing Lr34. Therefore, SWM10 is a highly useful marker to assist selection for Lr34 in breeding programs worldwide.

Indexed as

Minisatellite RepeatsAllelesChromosome MappingChromosomes, Artificial, BacterialExpressed Sequence TagsGenetic MarkersGenome, PlantImmunity, InnateMicrosatellite RepeatsNucleic Acid HybridizationOryzaPoaceaePolymorphism, GeneticPolyploidySequence Analysis, DNATriticumGenetic Markers

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.