Evidence map›Paper›PMID 16885028›Full record

ArticleMolecular cell2006

The EF-G-like GTPase Snu114p regulates spliceosome dynamics mediated by Brr2p, a DExD/H box ATPase.

Eliza C Small, Stephanie R Leggett, Adrienne A Winans, Jonathan P Staley

Abstract read
In one paragraph

Article in Molecular cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Novel Splice Site Pathogenic Variant ofDiagnostics (Basel, Switzerland) · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Structural Basis of Nuclear pre-mRNA Splicing: Lessons from Yeast.Cold Spring Harbor perspectives in biology · 2019
    Review
  20. Article

51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Eliza C SmallDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, Illinois 60637, USA.
Stephanie R Leggett
Adrienne A Winans
Jonathan P Staley

Funding

Molecular And Cellular Biology Training ProgramT32GM007183 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S, RICE, PHOEBE A · 1985 to 2021
$23.9M
Mechanisms for Rearranging RNA during Pre-mRNA Splicing - Renewal 01R01GM062264 · NIGMS · UNIVERSITY OF CHICAGO · PI STALEY, JONATHAN P · 2001 to 2019
$5.3M
NIGMS NIH HHS GM62264NIGMS NIH HHS R01 GM062264NIGMS NIH HHS T32 GM007183
6 · The paper itself

Abstract

Binding of a pre-mRNA substrate triggers spliceosome activation, whereas the release of the mRNA product triggers spliceosome disassembly. The mechanisms that underlie the regulation of these rearrangements remain unclear. We find evidence that the GTPase Snu114p mediates the regulation of spliceosome activation and disassembly. Specifically, both unwinding of U4/U6, required for spliceosome activation, and disassembly of the postsplicing U2/U6.U5.intron complex are repressed by Snu114p bound to GDP and derepressed by Snu114p bound to GTP or nonhydrolyzable GTP analogs. Further, similar to U4/U6 unwinding, spliceosome disassembly requires the DExD/H box ATPase Brr2p. Together, our data define a common mechanism for regulating and executing spliceosome activation and disassembly. Although sequence similarity with EF-G suggests Snu114p functions as a molecular motor, our findings indicate that Snu114p functions as a classic regulatory G protein. We propose that Snu114p serves as a signal-dependent switch that transduces signals to Brr2p to control spliceosome dynamics.

Indexed as

Adenosine TriphosphateDEAD-box RNA HelicasesGuanosine DiphosphateGuanosine TriphosphateIntronsModels, BiologicalMutationNucleic Acid ConformationRepressor ProteinsRibonucleoprotein, U5 Small NuclearRibonucleotidesRNA HelicasesRNA NucleotidyltransferasesRNA PrecursorsRNA, Small NuclearRNA SplicingAdenosine TriphosphateBRR2 protein, S cerevisiaeDEAD-box RNA HelicasesGuanosine DiphosphateGuanosine TriphosphatePRP22 protein, S cerevisiaePRP28 protein, S cerevisiaePRP43 protein, S cerevisiaeRepressor ProteinsRibonucleoprotein, U5 Small NuclearRibonucleotidesRNA HelicasesRNA NucleotidyltransferasesRNA PrecursorsRNA, Small NuclearRNA Splicing FactorsSaccharomyces cerevisiae ProteinsSNU114 protein, S cerevisiaeU2 small nuclear RNAU5 small nuclear RNAU6 small nuclear RNAxanthosine 5'-triphosphate

Identifiers

PMID16885028
PMCPMC3777414

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.