Evidence map›Paper›PMID 16882721›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Drosophila Rtf1 functions in histone methylation, gene expression, and Notch signaling.

Kristen Tenney, Mark Gerber, Anne Ilvarsonn, Jessica Schneider, Maria Gause, Dale Dorsett, Joel C Eissenberg, Ali Shilatifard

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 78 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Rtf1 Transcriptionally Regulates Neonatal and Adult Cardiomyocyte Biology.Journal of cardiovascular development and disease · 2023
    Article
  5. Article
  6. Article
  7. The PAF1 complex cell autonomously promotes oogenesis in Caenorhabditis elegans.Genes to cells : devoted to molecular & cellular mechanisms · 2022
    Article
  8. Day-night and seasonal variation of human gene expression across tissues.bioRxiv : the preprint server for biology · 2022
    Article
  9. Article
  10. Review
  11. TheApplied and environmental microbiology · 2019
    Article
  12. PAF1 complex component Leo1 helps recruitProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Transcription-generated torsional stress destabilizes nucleosomes.Nature structural & molecular biology · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Kristen TenneyEdward A. Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO 63104, USA.
Mark Gerber
Anne Ilvarsonn
Jessica Schneider
Maria Gause
Dale Dorsett
Joel C Eissenberg
Ali Shilatifard
Saint Louis University · US

Funding

Chromatin Modifications by Histone Ubiquitination and MethylationsR01GM069905 · NIGMS · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI SHILATIFARD, ALI · 2004 to 2015
$4.7M
LONG DISTANCE ENHANCER-PROMOTER INTERACTIONSR01GM055683 · NIGMS · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI DORSETT, DALE L · 1998 to 2012
$3.5M
Physiological Role of MLL and ELL Proteins in LeukemiaR01CA089455 · NCI · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI SHILATIFARD, ALI · 2001 to 2015
$3.5M
NCI NIH HHS 2R01CA089455NCI NIH HHS R01 CA089455NIGMS NIH HHS 1R01GM069905NIGMS NIH HHS R01 GM055683NIGMS NIH HHS R01 GM069905
6 · The paper itself

Abstract

The Rtf1 subunit of the Paf1 complex is required for proper monoubiquitination of histone H2B and methylation of histone H3 on lysines 4 (H3K4) and 79 in yeast Saccharomyces cerevisiae. Using RNAi, we examined the role of Rtf1 in histone methylation and gene expression in Drosophila melanogaster. We show that Drosophila Rtf1 (dRtf1) is required for proper gene expression and development. Furthermore, we show that RNAi-mediated reduction of dRtf1 results in a reduction in histone H3K4 trimethylation levels on bulk histones and chromosomes in vivo, indicating that the histone modification pathway via Rtf1 is conserved among yeast, Drosophila, and human. Recently, it was demonstrated that histone H3K4 methylation mediated via the E3 ligase Bre1 is critical for transcription of Notch target genes in Drosophila. Here we demonstrate that the dRtf1 component of the Paf1 complex functions in Notch signaling.

Indexed as

Gene Expression RegulationMethylationAmino Acid SequenceAnimalsDrosophila melanogasterDrosophila ProteinsFemaleHistonesMaleMolecular Sequence DataReceptors, NotchSequence Homology, Amino Acidatms protein, DrosophilaDrosophila ProteinsHistonesN protein, DrosophilaReceptors, NotchRtf1 protein, Drosophila

Identifiers

PMID16882721
PMCPMC1567682
OpenAlexW2042245037

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.