Evidence map›Paper›PMID 16880508›Full record

ArticleMolecular and cellular biology2006

Casein kinase 2 associates with initiation-competent RNA polymerase I and has multiple roles in ribosomal DNA transcription.

Tatiana B Panova, Kostya I Panov, Jackie Russell, Joost C B M Zomerdijk

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 58 citations in OpenAlex.

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  13. Linker histone H1 and protein-protein interactions.Biochimica et biophysica acta · 2016
    Review
  14. Review
  15. Akt activation enhances ribosomal RNA synthesis through casein kinase II and TIF-IA.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Tatiana B PanovaDivision of Gene Regulation and Expression, School of Life Sciences, Wellcome Trust Biocentre, University of Dundee, Dundee DD1 5EH, United Kingdom.
Kostya I Panov
Jackie Russell
Joost C B M Zomerdijk
University of Dundee · GB

Funding

Wellcome Trust 045160
6 · The paper itself

Abstract

Mammalian RNA polymerase I (Pol I) complexes contain a number of associated factors, some with undefined regulatory roles in transcription. We demonstrate that casein kinase 2 (CK2) in human cells is associated specifically only with the initiation-competent Pol Ibeta isoform and not with Pol Ialpha. Chromatin immunoprecipitation analysis places CK2 at the ribosomal DNA (rDNA) promoter in vivo. Pol Ibeta-associated CK2 can phosphorylate topoisomerase IIalpha in Pol Ibeta, activator upstream binding factor (UBF), and selectivity factor 1 (SL1) subunit TAFI110. A potent and selective CK2 inhibitor, 3,8-dibromo-7-hydroxy-4-methylchromen-2-one, limits in vitro transcription to a single round, suggesting a role for CK2 in reinitiation. Phosphorylation of UBF by CK2 increases SL1-dependent stabilization of UBF at the rDNA promoter, providing a molecular mechanism for the stimulatory effect of CK2 on UBF activation of transcription. These positive effects of CK2 in Pol I transcription contrast to that wrought by CK2 phosphorylation of TAFI110, which prevents SL1 binding to rDNA, thereby abrogating the ability of SL1 to nucleate preinitiation complex (PIC) formation. Thus, CK2 has the potential to regulate Pol I transcription at multiple levels, in PIC formation, activation, and reinitiation of transcription.

Indexed as

Transcription, GeneticAntigens, NeoplasmCasein Kinase IIChromatin ImmunoprecipitationDNA-Binding ProteinsDNA-Directed RNA PolymerasesDNA, RibosomalDNA Topoisomerases, Type IIHeLa CellsHumansPhosphorylationPhosphotransferasesPol1 Transcription Initiation Complex ProteinsPromoter Regions, GeneticProtein BindingProtein SubunitsAntigens, NeoplasmCasein Kinase IIDNA-Binding ProteinsDNA-Directed RNA PolymerasesDNA, RibosomalDNA Topoisomerases, Type IIPhosphotransferasesPol1 Transcription Initiation Complex ProteinsProtein SubunitsRNA polymerase beta subunitTranscription Factor TFIIDtranscription factor UBF

Identifiers

PMID16880508
PMCPMC1592790
OpenAlexW2095865290

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.