Evidence map›Paper›PMID 16878149›Full record

ArticleOncogene2007

Hypoxic repression of STAT1 and its downstream genes by a pVHL/HIF-1 target DEC1/STRA13.

S V Ivanov, K Salnikow, A V Ivanova, L Bai, M I Lerman

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Mechanisms of HIF-driven immunosuppression in tumour microenvironment.Journal of the Egyptian National Cancer Institute · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. DEC1 is required for anti-apoptotic activity of gastric cancer cells under hypoxia by promoting Survivin expression.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2018
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 1 country.

S V IvanovBasic Research Program, SAIC-Frederick, Inc., Frederick, MD 21702, USA. Sergey.Ivanov@med.nyu.edu
K Salnikow
A V Ivanova
L Bai
M I Lerman
Frederick National Laboratory for Cancer Research · USNational Cancer Institute · USNYU Langone Health · USScience Applications International Corporation (United States) · USUniversity of Michigan–Ann Arbor · US

Funding

Functional Analysis of Cancer Genes from Human Chromosome 3pZ01BC008579 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LERMAN, MICHAEL · 1996 to 2008
$804k
Intramural NIH HHSNCI NIH HHS N01-CO-12400
6 · The paper itself

Abstract

DEC1/STRA13 is a bHLH type transcriptional regulator involved with immune regulation, hypoxia response and carcinogenesis. We recently demonstrated that STRA13 interacts with STAT3 in the transcriptional activation of STAT-dependent promoters. Here, we pursue STRA13 involvement in the JAK/STAT pathway by studying its role in STAT1 expression. First, we showed that VHL deficiency or HIF-1 activation resulted in the repression of endogenous STAT1 mediated by STRA13. We then characterized the STAT1 proximal promoter to assess its response to STRA13 by transient coexpression in a luciferase reporter assay. Using sequential truncation and site-directed mutagenesis of the STAT1 promoter with STRA13 deletion constructs, we showed that the STRA13 C-terminal trans-activation domain, which is known to bind HDAC1, mostly determines the repressive activity. Involvement of HDAC activity in STAT1 regulation was validated by TSA inhibition and chromatin immunoprecipitation (ChIP) assay. Thus, we demonstrate that STRA13-mediated repression of STAT1 transcription utilizes an HDAC1-dependent mechanism. Furthermore, we show that targets of unphosphorylated STAT1, such as antigen presenting genes and CASP1, are also repressed by hypoxia possibly through the same STRA13-mediated mechanism. Thus, the newly discovered link between HIF-1 and STAT1 reveals a previously unknown role of STRA13 in hypoxia and carcinogenesis.

Indexed as

Down-RegulationAmino Acid MotifsAnimalsBase SequenceBasic Helix-Loop-Helix ProteinsCell HypoxiaCell LineCysteine EndopeptidasesGene Expression Regulation, NeoplasticHistone DeacetylasesHomeodomain ProteinsHumansHypoxia-Inducible Factor 1MiceMice, KnockoutMolecular Sequence DataBasic Helix-Loop-Helix ProteinsBHLHE40 protein, humanBhlhe40 protein, mouseCysteine EndopeptidasesHistone DeacetylasesHomeodomain ProteinsHypoxia-Inducible Factor 1LMP-2 proteinProto-Oncogene Proteins c-mybSTAT1 protein, humanSTAT1 Transcription Factor

Identifiers

PMID16878149
OpenAlexW1974852074

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.