Evidence map›Paper›PMID 16878147›Full record

ArticleOncogene2007

Gene amplification and associated loss of 5' regulatory sequences of CoAA in human cancers.

Y Sui, Z Yang, S Xiong, L Zhang, K L Blanchard, S C Peiper, W S Dynan, D Tuan, L Ko

Open access · bronzeAbstract read
In one paragraph

Article in Oncogene, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  6. Protein phase separation: A novel therapy for cancer?British journal of pharmacology · 2020
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  9. Roles of RNA-Binding Proteins in DNA Damage Response.International journal of molecular sciences · 2016
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  13. TEThered to Runx: novel binding partners for runx factors.Blood cells, molecules & diseases · 2010
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Y SuiDepartment of Pathology, Medical College of Georgia, Augusta, GA 30912, USA.
Z Yang
S Xiong
L Zhang
K L Blanchard
S C Peiper
W S Dynan
D Tuan
L Ko
Augusta University · USEli Lilly (United States) · US

Funding

Regulation of DNA Double-Strand Break RepairR01CA098239 · NCI · MEDICAL COLLEGE OF GEORGIA (MCG) · PI DYNAN, WILLIAM S. · 2004 to 2013
$2.1M
Long-range function of the ERV-9 LTR in regulating globin gene switchingR01HL089519 · NHLBI · AUGUSTA UNIVERSITY · PI TUAN, DOROTHY Y · 2008 to 2012
$1.8M
Gamma-globin gene silencing in human red cellsR01HL073453 · NHLBI · MEDICAL COLLEGE OF GEORGIA (MCG) · PI TUAN, DOROTHY Y · 2003 to 2006
$1.1M
NCI NIH HHS R01 CA098239NHLBI NIH HHS R01 HL073453NHLBI NIH HHS R01 HL089519
6 · The paper itself

Abstract

CoAA is an RRM-containing transcriptional coactivator that stimulates transcriptional activation and regulates alternative splicing. We show that the CoAA gene is amplified at the chromosome 11q13 locus in a subset of primary human cancers including non-small cell lung carcinoma, squamous cell skin carcinoma and lymphoma. Analysis of 42 primary tumors suggests that CoAA amplifies independently from the CCND1 locus. Detailed mapping of three CoAA amplicons reveals that the amplified CoAA gene is consistently located at the 5' boundaries of the amplicons. The CoAA coding and basal promoter sequences are retained within the amplicons but upstream silencing sequences are lost. CoAA protein is overexpressed in tumors containing the amplified CoAA gene. RNA dot blot analysis of 100 cases of primary tumors suggests elevated CoAA mRNA expression. CoAA positively regulates its own basal promoter in transfection assays. Thus, gene amplification, loss of silencing sequence and positive feedback regulation may lead to drastic upregulation of CoAA protein. CoAA has transforming activities when tested in soft agar assays, and CoAA is homologous to oncoproteins EWS and TLS, which regulate alternative splicing. These data imply that CoAA may share a similar oncogenic mechanism with oncogene EWS and that CoAA deregulation may alter the alternative splicing of target genes.

Indexed as

AnimalsCell LineCell Transformation, NeoplasticChromosomes, Human, Pair 11Cyclin DCyclinsGene AmplificationGene Expression Regulation, NeoplasticHaplorhiniHumansIn Situ Hybridization, FluorescenceIntracellular Signaling Peptides and ProteinsMiceNeoplasmsOligonucleotide Array Sequence AnalysisOncogene ProteinsCyclin DCyclinsIntracellular Signaling Peptides and ProteinsOncogene ProteinsRBM14 protein, humanRNA, Messenger

Identifiers

PMID16878147
PMCPMC9245580
OpenAlexW1995608266

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.