ArticleJournal of applied genetics2006
Development of an efficient retrotransposon-based fingerprinting method for rapid pea variety identification.
Article in Journal of applied genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed.
- Analysis of genetic diversity in pigeon pea germplasm using retrotransposon-based molecular markers.Journal of genetics · 2017Article
- Article
- Ty1-copia elements reveal diverse insertion sites linked to polymorphisms among flax (Linum usitatissimum L.) accessions.BMC genomics · 2016Article
- Useful parasites: the evolutionary biology and biotechnology applications of transposable elements.Journal of genetics · 2016Review
- Transcriptionally active LTR retrotransposons in Eucalyptus genus are differentially expressed and insertionally polymorphic.BMC plant biology · 2015Article
- Effectiveness of AFLPs and retrotransposon-based markers for the identification of Portuguese grapevine cultivars and clones.Molecular biotechnology · 2012Article
- Genetic diversity of cultivated flax (Linum usitatissimum L.) germplasm assessed by retrotransposon-based markers.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Review
- Genome merger: from sequence rearrangements in triticale to their elimination in wheat-rye addition lines.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010Article
- Genetic diversity and population structure of pea (Pisum sativum L.) varieties derived from combined retrotransposon, microsatellite and morphological marker analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2008Article
- Polyploidization as a retraction force in plant genome evolution: sequence rearrangements in triticale.PloS one · 2008Article
- Variety discrimination in pea (Pisum sativum L.) by molecular, biochemical and morphological markers.Journal of applied genetics · 2008Article
- Assessment of genetic and epigenetic stability in long-term in vitro shoot culture of pea (Pisum sativum L.).Plant cell reports · 2007Article
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Authors and funding
1 author.
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Abstract
Fast and efficient DNA fingerprinting of crop cultivars and individuals is frequently used in both theoretical population genetics and in practical breeding. Numerous DNA marker technologies exist and the ratio of speed, cost and accuracy are of importance. Therefore even in species where highly accurate and polymorphic marker systems are available, such as microsatellite SSR (simple sequence repeats), also alternative methods may be of interest. Thanks to their high abundance and ubiquity, temporary mobile retrotransposable elements come into recent focus. Their properties, such as genome wide distribution and well-defined origin of individual insertions by descent, predetermine them for use as molecular markers. In this study, several Ty3-gypsy type retrotransposons have been developed and adopted for the inter-retrotransposon amplified polymorphism (IRAP) method, which is suitable for fast and efficient pea cultivar fingerprinting. The method can easily distinguish even between genetically closely related pea cultivars and provide high polymorphic information content (PIC) in a single PCR analysis.
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