Evidence map›Paper›PMID 16873239›Full record

ArticleJournal of virology2006

Cleavage map and proteolytic processing of the murine norovirus nonstructural polyprotein in infected cells.

Stanislav V Sosnovtsev, Gaël Belliot, Kyeong-Ok Chang, Victor G Prikhodko, Larissa B Thackray, Christiane E Wobus, Stephanie M Karst, Herbert W Virgin, Kim Y Green

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 213 citations in OpenAlex.

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56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Stanislav V SosnovtsevLaboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892-8007, USA. ss216m@nih.gov
Gaël Belliot
Kyeong-Ok Chang
Victor G Prikhodko
Larissa B Thackray
Christiane E Wobus
Stephanie M Karst
Herbert W Virgin
Kim Y Green
Washington University in St. Louis · USNational Institute of Allergy and Infectious Diseases · USNational Institutes of Health · US

Funding

IMMUNITY AND PATHOGENESIS OF A NOVEL NOROVIRUSR01AI054483 · NIAID · WASHINGTON UNIVERSITY · PI VIRGIN, HERBERT W · 2003 to 2012
$3.7M
The Norwalk-like Caliciviruses: Epidemic GastroenteritisZ01AI000897 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI GREEN, KIM Y. · 2001 to 2008
$3.6M
NIAID NIH HHS R01 AI054483
6 · The paper itself

Abstract

Murine norovirus (MNV) is presently the only member of the genus Norovirus in the Caliciviridae that can be propagated in cell culture. The goal of this study was to elucidate the proteolytic processing strategy of MNV during an authentic replication cycle in cells. A proteolytic cleavage map of the ORF1 polyprotein was generated, and the virus-encoded 3C-like (3CL) proteinase (Pro) mediated cleavage at five dipeptide cleavage sites, 341E/G342, Q705/N706, 870E/G871, 994E/A995, and 1177Q/G1178, that defined the borders of six proteins with the gene order p38.3 (Nterm)-p39.6 (NTPase)-p18.6-p14.3 (VPg)-p19.2 (Pro)-p57.5 (Pol). Bacterially expressed MNV 3CL Pro was sufficient to mediate trans cleavage of the ORF1 polyprotein containing the mutagenized Pro sequence into products identical to those observed during cotranslational processing of the authentic ORF1 polyprotein in vitro and to those observed in MNV-infected cells. Immunoprecipitation and Western blot analysis of proteins produced in virus-infected cells demonstrated efficient cleavage of the proteinase-polymerase precursor. Evidence for additional processing of the Nterm protein in MNV-infected cells by caspase 3 was obtained, and Nterm sequences 118DRPD121 and 128DAMD131 were mapped as caspase 3 cleavage sites by site-directed mutagenesis. The availability of the MNV nonstructural polyprotein cleavage map in concert with a permissive cell culture system should facilitate studies of norovirus replication.

Indexed as

Amino Acid SequenceAnimalsCaliciviridae InfectionsCaspase 3CaspasesCells, CulturedCysteine EndopeptidasesImmunoprecipitationMiceMolecular Sequence DataMutagenesisNorovirusPolyproteinsViral Nonstructural ProteinsVirus ReplicationCasp3 protein, mouseCaspase 3CaspasesCysteine EndopeptidasesPolyproteinsViral Nonstructural Proteins

Identifiers

PMID16873239
PMCPMC1563789
OpenAlexW2007292577

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.