Evidence map›Paper›PMID 16861646›Full record

ArticleInfection and immunity2006

Signature-tagged mutagenesis of Klebsiella pneumoniae to identify genes that influence biofilm formation on extracellular matrix material.

Jennifer D Boddicker, Rebecca A Anderson, Jennifer Jagnow, Steven Clegg

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 88 citations in OpenAlex.

  1. Genetic features of blaBMC microbiology · 2025
    Article
  2. Review
  3. O-antigen polysaccharides inMicrobiology and molecular biology reviews : MMBR · 2025
    Review
  4. Article
  5. Biomolecular NMR assignments · 2024
    Article
  6. Relationship between biofilm formation and antibiotic resistance ofFrontiers in cellular and infection microbiology · 2024
    Review
  7. InvestigatingAccess microbiology · 2023
    Article
  8. Regulation of biofilm formation inFrontiers in microbiology · 2023
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Prophylaxis and Treatment againstInternational journal of molecular sciences · 2021
    Review
  14. Article
  15. Article
  16. Classification of Clinical Isolates ofFrontiers in microbiology · 2019
    Article
  17. Article
  18. Article
  19. Klebsiella pneumoniae: Going on the Offense with a Strong Defense.Microbiology and molecular biology reviews : MMBR · 2016
    Review
  20. Isolation and Characterization of Aquatic-Borne Klebsiella pneumoniae from Tropical Estuaries in Malaysia.International journal of environmental research and public health · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jennifer D BoddickerDepartment of Microbiology, College of Medicine, University of Iowa, Iowa City, Iowa 52242, USA.
Rebecca A Anderson
Jennifer Jagnow
Steven Clegg
University of Iowa · US

Funding

Training Program in Hypertension, Kidney Disease & Cell BiologyT32DK007690 · NIDDK · UNIVERSITY OF IOWA · PI HUANG, CHOU-LONG, RAHMOUNI, KAMAL · 1992 to 2022
$2.8M
Pathogenesis of Klebsiells airway infectionsR01AI050011 · NIAID · UNIVERSITY OF IOWA · PI CLEGG, STEVEN · 2003 to 2010
$2.2M
NIAID NIH HHS AI050011NIAID NIH HHS R01 AI050011NIDDK NIH HHS 5 T32 DK07690-13NIDDK NIH HHS T32 DK007690
6 · The paper itself

Abstract

Klebsiella pneumoniae causes urinary tract infections, respiratory tract infections, and septicemia in susceptible individuals. Strains of Klebsiella frequently produce extended-spectrum beta-lactamases, and infections with these strains can lead to relatively high mortality rates (approximately 15%). Other virulence factors include production of an antiphagocytic capsule and outer membrane lipopolysaccharide (LPS), which mediates serum resistance, as well as fimbriae on the surface of the bacteria. Type 1 fimbriae mediate adherence to many types of epithelial cells and may facilitate adherence of the bacteria to the bladder epithelium. Type 3 fimbriae can bind in vitro to the extracellular matrix of urinary and respiratory tissues, suggesting that they mediate binding to damaged epithelial surfaces. In addition, type 3 fimbriae are required for biofilm formation by Klebsiella pneumoniae on plastics and human extracellular matrix; thus, they may facilitate the formation of treatment-resistant biofilm on indwelling plastic devices, such as catheters and endotracheal tubing. The presence of these devices may cause tissue damage, allowing Klebsiella to grow as a biofilm on exposed tissue basement membrane components. Though in vivo biofilm growth may be an important step in the infection process, little is known about the genetic factors required for biofilm formation by Klebsiella pneumoniae. Thus, we performed signature-tagged mutagenesis to identify factors produced by K. pneumoniae strain 43816 that are required for biofilm formation. We identified mutations in the cps capsule gene cluster, previously unidentified transcriptional regulators, fimbrial, and sugar phosphotransferase homologues, as well as genetic loci of unknown function, that affect biofilm formation.

Indexed as

Gene Expression Regulation, BacterialAnimalsBacterial ProteinsBiofilmsDNA Transposable ElementsExtracellular MatrixFemaleHumansKlebsiella InfectionsKlebsiella pneumoniaeMiceMice, Inbred BALB CMutagenesis, InsertionalBacterial ProteinsDNA Transposable Elements

Identifiers

PMID16861646
PMCPMC1539622
OpenAlexW2135992104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.