Evidence map›Paper›PMID 16848760›Full record

ArticleThe Biochemical journal2006

Man2C1, an alpha-mannosidase, is involved in the trimming of free oligosaccharides in the cytosol.

Tadashi Suzuki, Izumi Hara, Miyako Nakano, Masaki Shigeta, Takatoshi Nakagawa, Akihiro Kondo, Yoko Funakoshi, Naoyuki Taniguchi

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 89 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. N-Glycosylation.Advances in experimental medicine and biology · 2021
    Article
  6. Article
  7. Article
  8. Cytosolic FreeFrontiers in plant science · 2020
    Article
  9. Free glycans derived fromThe Journal of biological chemistry · 2019
    Article
  10. Iminosugar antivirals: the therapeutic sweet spot.Biochemical Society transactions · 2017
    Review
  11. Article
  12. Article
  13. Article
  14. Generation and degradation of free asparagine-linked glycans.Cellular and molecular life sciences : CMLS · 2015
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Tadashi SuzukiDepartment of Biochemistry, Osaka University Graduate School of Medicine, Osaka, 565-0871, Japan. tsuzuki@biochem.med.osaka-u.ac.jp
Izumi Hara
Miyako Nakano
Masaki Shigeta
Takatoshi Nakagawa
Akihiro Kondo
Yoko Funakoshi
Naoyuki Taniguchi
Osaka University · JPJapan Science and Technology Agency · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The endoplasmic-reticulum-associated degradation of misfolded (glyco)proteins ensures that only functional, correctly folded proteins exit from the endoplasmic reticulum and that misfolded ones are degraded by the ubiquitin-proteasome system. During the degradation of misfolded glycoproteins, they are deglycosylated by the PNGase (peptide:N-glycanase). The free oligosaccharides released by PNGase are known to be further catabolized by a cytosolic alpha-mannosidase, although the gene encoding this enzyme has not been identified unequivocally. The findings in the present study demonstrate that an alpha-mannosidase, Man2C1, is involved in the processing of free oligosaccharides that are formed in the cytosol. When the human Man2C1 orthologue was expressed in HEK-293 cells, most of the enzyme was localized in the cytosol. Its activity was enhanced by Co2+, typical of other known cytosolic alpha-mannosidases so far characterized from animal cells. The down-regulation of Man2C1 activity by a small interfering RNA drastically changed the amount and structure of oligosaccharides accumulating in the cytosol, demonstrating that Man2C1 indeed is involved in free oligosaccharide processing in the cytosol. The oligosaccharide processing in the cytosol by PNGase, endo-beta-N-acetylglucosaminidase and alpha-mannosidase may represent the common 'non-lysosomal' catabolic pathway for N-glycans in animal cells, although the molecular mechanism as well as the functional importance of such processes remains to be determined.

Indexed as

Alkaloidsalpha-MannosidaseBlotting, WesternCell LineChromatography, High Pressure LiquidCobaltCytosolGene Expression Regulation, EnzymologicGreen Fluorescent ProteinsHumansImmunohistochemistryMannosidasesMembrane GlycoproteinsOligopeptidesOligosaccharidesPeptidesAlkaloidsalpha-MannosidaseCobaltcobaltous chlorideFLAG peptideGreen Fluorescent ProteinskifunensineMAN2C1 protein, humanMannosidasesMembrane GlycoproteinsOligopeptidesOligosaccharidesPeptidesRecombinant Fusion ProteinsSwainsonine

Identifiers

PMID16848760
PMCPMC1635433
OpenAlexW2010751343

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.