Evidence map›Paper›PMID 16847467›Full record

ArticleThe pharmacogenomics journal2007

Analysis of nucleotide diversity of NAT2 coding region reveals homogeneity across Native American populations and high intra-population diversity.

S Fuselli, R H Gilman, S J Chanock, S L Bonatto, G De Stefano, C A Evans, D Labuda, D Luiselli, F M Salzano, G Soto and 4 more

Open access · greenAbstract readComparative StudyMulticenter Study
In one paragraph

Article in The pharmacogenomics journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 11 institutions in 7 countries.

S FuselliDepartment of Forensic Medicine, University of Helsinki, Helsinki, Finland.
R H Gilman
S J Chanock
S L Bonatto
G De Stefano
C A Evans
D Labuda
D Luiselli
F M Salzano
G Soto
G Vallejo
A Sajantila
D Pettener
E Tarazona-Santos
Johns Hopkins University · USUniversity of Bologna · ITUniversity of Helsinki · FICentre Hospitalier Universitaire Sainte-Justine · CANational Cancer Institute · USPontifícia Universidade Católica do Rio Grande do Sul · BRPrisma · PEUniversidade Federal de Minas Gerais · BRUniversidade Federal do Rio Grande do Sul · BRUniversity of Rome Tor Vergata · ITUniversity of Tolima · CO

Funding

MOLECULAR STUDY OF HOST RESPONSE/GENETIC RISK FACTORS OF INFECTION COMPLICATIONZ01SC010083 · SC · CLINICAL SCIENCES · PI CHANOCK, STEPHEN J · 1997 to 2007
$1.1M
Wellcome Trust 057434
6 · The paper itself

Abstract

N-acetyltransferase 2 (NAT2), an important enzyme in clinical pharmacology, metabolizes antibiotics such as isoniazid and sulfamethoxazole, and catalyzes the transformation of aromatic and heterocyclic amines from the environment and diet into carcinogenic intermediates. Polymorphisms in NAT2 account for variability in the acetylator phenotype and the pharmacokinetics of metabolized drugs. Native Americans, settled in rural areas and large cities of Latin America, are under-represented in pharmacogenetics studies; therefore, we sequenced the coding region of NAT2 in 456 chromosomes from 13 populations from the Americas, and two from Siberia, detecting nine substitutions and 11 haplotypes. Variants *4 (37%), *5B (23%) and *7B (24%) showed high frequencies. Average frequencies of fast, intermediate and slow acetylators across Native Americans were 18, 56 and 25%, respectively. NAT2 intra-population genetic diversity for Native Americans is higher than East Asians and similar to the rest of the world, and NAT2 variants are homogeneously distributed across native populations of the continent.

Indexed as

Genetic VariationOpen Reading FramesAcetylationAmericasArylamine N-AcetyltransferaseDNA Mutational AnalysisEvolution, MolecularGene FrequencyGenetics, PopulationGenotypeHaplotypesHumansIndians, North AmericanMutationPhenotypePolymorphism, Single NucleotideArylamine N-AcetyltransferaseNAT2 protein, human

Identifiers

PMID16847467
PMCPMC3099416
OpenAlexW2105150244

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.