Evidence map›Paper›PMID 16845468›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2006

Genetic bases of renal agenesis in the ACI rat: mapping of Renag1 to chromosome 14.

James D Shull, Cynthia M Lachel, Tracy E Strecker, Thomas J Spady, Martin Tochacek, Karen L Pennington, Clare R Murrin, Jane L Meza, Beverly S Schaffer, Lisa A Flood and 1 more

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact, top 88% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Segmental aplasia of a uterine horn in two RccHan:WIST rats.Journal of toxicologic pathology · 2019
    Article
  3. Article
  4. Article
  5. Heterogeneous stock rats: a new model to study the genetics of renal phenotypes.American journal of physiology. Renal physiology · 2010
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

James D ShullDepartment of Genetics, Cell Biology and Anatomy, University of Nebraska Medical Center, Omaha, 68198, USA. jshull@unmc.edu
Cynthia M Lachel
Tracy E Strecker
Thomas J Spady
Martin Tochacek
Karen L Pennington
Clare R Murrin
Jane L Meza
Beverly S Schaffer
Lisa A Flood
Karen A Gould
University of Nebraska Medical Center · US

Funding

UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Apar Kishor Ganti · 1985 to 2026
$55.0M
CHEMICAL CARCINOGENESIS &CANCER BIOLOGYT32CA009476 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Jennifer D. Black · 1988 to 2026
$6.2M
GENETIC SUSCEPTIBILITY TO ESTROGEN INDUCED MAMMARY CAR01CA077876 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI SHULL, JAMES D · 1998 to 2012
$4.4M
ESTROGENS, DIETARY ENERGY AND PITUITARY TUMORIGENESISR01CA068529 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SHULL, JAMES D · 1995 to 2002
$924k
Genetic Etilogy of Renal Agenesis in the ACI RatR21DK070669 · NIDDK · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SHULL, JAMES D · 2005 to 2006
$291k
NCI NIH HHS P30-CA36727NCI NIH HHS R01 CA077876NCI NIH HHS R01-CA68529NCI NIH HHS R01-CA77876NCI NIH HHS T32-CA09476NIDDK NIH HHS R21-DK70669
6 · The paper itself

Abstract

Unilateral renal agenesis (URA) is a common developmental defect in humans, occurring at a frequency of approximately 1 in 500-1,000 births. Several genetic syndromes include bilateral or unilateral renal agenesis as an associated phenotype. However, URA frequently occurs in individuals not afflicted by these syndromes and is often asymptomatic. Although it is clear that genetic factors contribute to the etiology of URA, the genetic bases of URA are poorly defined at this time. ACI rats, both males and females, exhibit URA at an incidence of 5%-15%. In this article we characterize the incidence of URA in female and male F(1), F(2), and backcross (BC) progeny from reciprocal genetic crosses between the ACI strain and the unaffected Brown Norway (BN) strain. Through interval mapping analyses of 353 phenotypically defined female F(2) progeny, we mapped to rat Chromosome 14 (RNO14) a genetic locus, designated Renag1 (Renal agenesis 1), that serves as the major determinant of URA in these crosses. Further genotypic analyses of URA-affected female and male F(2) and BC progeny localized Renag1 to a 14.4-Mb interval on RNO14 bounded by markers D14Rat50 and D14Rat12. The data from these genetic studies suggest that the ACI allele of Renag1 acts in an incompletely dominant and incompletely penetrant manner to confer URA.

Indexed as

AnimalsChromosome MappingChromosomes, MammalianFemaleKidneyMaleRatsRats, Inbred ACIRats, Inbred BN

Identifiers

PMID16845468
OpenAlexW2040501891

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.