Evidence map›Paper›PMID 16841966›Full record

ArticleChemical research in toxicology2006

Synthesis and mutagenesis of the butadiene-derived N3 2'-deoxyuridine adducts.

Priscilla H Fernandes, Linda C Hackfeld, Ivan D Kozekov, Richard P Hodge, R Stephen Lloyd

Open access · greenAbstract read
In one paragraph

Article in Chemical research in toxicology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Priscilla H FernandesCenter for Research on Occupational and Environmental Toxicology, and Department of Molecular and Medical Genetics, Oregon Health and Science University, Portland, 97239-3098, USA.
Linda C Hackfeld
Ivan D Kozekov
Richard P Hodge
R Stephen Lloyd
Oregon Health & Science University · USVanderbilt University · US

Funding

Synthetic Organic Chemistry CoreP30ES006676 · NIEHS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI ELFERINK, CORNELIS JOHAN · 1995 to 2017
$21.7M
Structural Biology Facility CoreP30ES000267 · NIEHS · VANDERBILT UNIVERSITY · PI GUENGERICH, F PETER · 1985 to 2014
$20.3M
SYNTHETIC APPROACHES TO PAH-ADDUCTED NUCLEOTIDESP01ES005355 · NIEHS · VANDERBILT UNIVERSITY · PI LLOYD, STEPHEN CARROLL · 1991 to 2010
$13.4M
Role of metabolism in toxicity of inhaled 1,3 butadieneS11ES010018 · NIEHS · SOUTHERN UNIV A&M COL BATON ROUGE · PI MUGANDA, PERPETUA M · 1999 to 2003
$3.8M
NIEHS NIH HHS P01 ES005355NIEHS NIH HHS P01-ES05355NIEHS NIH HHS P30 ES000267NIEHS NIH HHS P30-ES00267NIEHS NIH HHS P30 ES006676NIEHS NIH HHS P30-ES06676NIEHS NIH HHS S11 ES010018
6 · The paper itself

Abstract

1,3-Butadiene is a known carcinogen and mutagen that acts through a variety of metabolic intermediates that react with DNA, forming stable and unstable lesions on dG, dA, dC, and dT. The N3 2'-deoxyuridine adducts are a highly stable, stereoisomeric mixture of adducts derived from the reaction of cytosine with the monoepoxide metabolite of butadiene, followed by spontaneous deamination. In this study, the phosphoramidites and subsequent oligodeoxynucleotides containing the N3 2'-deoxyuridine adducts have been constructed and characterized. Using a single-stranded shuttle vector DNA, the mutagenic potential of these adducts has been tested following replication in mammalian cells. Replication past the N3 2'-deoxyuridine adducts was found to be highly mutagenic with an overall mutation yield of approximately 97%. The major mutations that were observed were C to T transitions and C to A transversions. In vitro, these adducts posed a complete block to both the Klenow fragment of Escherichia coli polymerase I and polymerase epsilon, while these lesions significantly blocked polymerase delta. These data suggested a possible involvement of bypass polymerases in the in vivo replication of these lesions. Overall, these findings indicate that the N3 2'-deoxyuridine adducts are highly mutagenic lesions that may contribute to butadiene-mediated carcinogenesis.

Indexed as

Base SequenceButadienesCarcinogensDeoxyuridineDNA AdductsDNA ReplicationMolecular Sequence DataMolecular StructureMutagensOligonucleotidesOrganophosphorus Compounds1,3-butadieneButadienesCarcinogensDeoxyuridineDNA AdductsMutagensOligonucleotidesOrganophosphorus Compoundsphosphoramidite

Identifiers

PMID16841966
PMCPMC2526974
OpenAlexW2043601097

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.