Evidence map›Paper›PMID 16836768›Full record

ArticleGenome biology2006

Signatures of human regulatory T cells: an encounter with old friends and new players.

Susanne Pfoertner, Andreas Jeron, Michael Probst-Kepper, Carlos A Guzman, Wiebke Hansen, Astrid M Westendorf, Tanja Toepfer, Andres J Schrader, Anke Franzke, Jan Buer and 1 more

Open access · goldAbstract readValidation Study
In one paragraph

Article in Genome biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 104 citations in OpenAlex.

  1. Trial
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  6. Zfra Overrides WWOX in Suppressing the Progression of Neurodegeneration.International journal of molecular sciences · 2024
    Review
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  8. CD4BMC biology · 2023
    Article
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  16. Histone Deacetylation Inhibitors as Modulators of Regulatory T Cells.International journal of molecular sciences · 2020
    Review
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Susanne PfoertnerDepartment of Mucosal Immunity, German Research Centre for Biotechnology, Braunschweig, Germany.
Andreas Jeron
Michael Probst-Kepper
Carlos A Guzman
Wiebke Hansen
Astrid M Westendorf
Tanja Toepfer
Andres J Schrader
Anke Franzke
Jan Buer
Robert Geffers
Helmholtz Centre for Infection Research · DEMedizinische Hochschule Hannover · DEPhilipps University of Marburg · DEVolkswagen Foundation · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNaturally occurring CD4+ CD25+ regulatory T cells (TReg) are involved in the control of autoimmune diseases, transplantation tolerance, and anti-tumor immunity. Thus far, genomic studies on TReg cells were restricted to murine systems, and requirements for their development, maintenance, and mode of action in humans are poorly defined.

resultsTo improve characterization of human TReg cells, we compiled a unique microarray consisting of 350 TReg cell associated genes (Human TReg Chip) based on whole genome transcription data from human and mouse TReg cells. TReg cell specific gene signatures were created from 11 individual healthy donors. Statistical analysis identified 62 genes differentially expressed in TReg cells, emphasizing some cross-species differences between mice and humans. Among them, several 'old friends' (including FOXP3, CTLA4, and CCR7) that are known to be involved in TReg cell function were recovered. Strikingly, the vast majority of genes identified had not previously been associated with human TReg cells (including LGALS3, TIAF1, and TRAF1). Most of these 'new players' however, have been described in the pathogenesis of autoimmunity. Real-time RT-PCR of selected genes validated our microarray results. Pathway analysis was applied to extract signaling modules underlying human TReg cell function.

conclusionThe comprehensive set of genes reported here provides a defined starting point to unravel the unique characteristics of human TReg cells. The Human TReg Chip constructed and validated here is available to the scientific community and is a useful tool with which to study the molecular mechanisms that orchestrate TReg cells under physiologic and diseased conditions.

Indexed as

AdultApoptosisAutoimmunityBase SequenceCD4-Positive T-LymphocytesCell SeparationCell SurvivalDNA PrimersFemaleGene Expression ProfilingHumansImmunophenotypingInterleukin-2 Receptor alpha SubunitMaleMiddle AgedOligonucleotide Array Sequence AnalysisDNA PrimersInterleukin-2 Receptor alpha Subunit

Identifiers

PMID16836768
PMCPMC1779567
OpenAlexW2158803537

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.