Evidence map›Paper›PMID 16829591›Full record

ArticleThe Plant cell2006

CONSTITUTIVELY PHOTOMORPHOGENIC1 is required for the UV-B response in Arabidopsis.

Attila Oravecz, Alexander Baumann, Zoltán Máté, Agnieszka Brzezinska, Jean Molinier, Edward J Oakeley, Eva Adám, Eberhard Schäfer, Ferenc Nagy, Roman Ulm

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 174 papers.

0numbers the graph read from it
0cells of the map it votes in
174citing papers in PubMed
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

174 citing papers in PubMed, 403 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. UV wavelength- and dose-dependent changes in the biosynthesis of phenolic compounds in kale (Brassica oleracea var. acephala) plants.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Plant tolerance mechanisms to DNA-damaging UV stress.Journal of experimental botany · 2025
    Review
  11. Review
  12. Article
  13. Molecular underpinnings ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2025
    Article
  14. Photoreceptor-induced LHL4 protects the photosystem II monomer inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article

114 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Attila OraveczInstitute of Biology II/Botany, University of Freiburg, D-79104 Freiburg, Germany.
Alexander Baumann
Zoltán Máté
Agnieszka Brzezinska
Jean Molinier
Edward J Oakeley
Eva Adám
Eberhard Schäfer
Ferenc Nagy
Roman Ulm
University of Freiburg · DEInstitute of Plant Biology · HUFriedrich Miescher Institute · CHAgricultural Biotechnology Institute · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CONSTITUTIVELY PHOTOMORPHOGENIC1 (COP1) is a negative regulator of photomorphogenesis in Arabidopsis thaliana. COP1 functions as an E3 ubiquitin ligase, targeting select proteins for proteasomal degradation in plants as well as in mammals. Among its substrates is the basic domain/leucine zipper (bZIP) transcription factor ELONGATED HYPOCOTYL5 (HY5), one of the key regulators of photomorphogenesis under all light qualities, including UV-B responses required for tolerance to this environmental threat. Here, we report that, in contrast with the situation in visible light, COP1 is a critical positive regulator of responses to low levels of UV-B. We show that in the cop1-4 mutant, flavonoid accumulation and genome-wide expression changes in response to UV-B are blocked to a large extent. COP1 is required for HY5 gene activation, and both COP1 and HY5 proteins accumulate in the nucleus under supplementary UV-B. SUPPRESSOR OF PHYTOCHROME A-105 family proteins (SPA1 to SPA4) that are required for COP1 function in dark and visible light are not essential in the response to UV-B. We conclude that COP1 performs a specific and novel role in the plants' photomorphogenic response to UV-B, coordinating HY5-dependent and -independent pathways, which eventually results in UV-B tolerance.

Indexed as

Ultraviolet RaysArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsCell NucleusFlavonoidsGene Expression Regulation, PlantGenes, PlantHypocotylMutationNuclear ProteinsTranscriptional ActivationUbiquitin-Protein LigasesArabidopsis ProteinsAT2G32950 protein, ArabidopsisBasic-Leucine Zipper Transcription FactorsFlavonoidsHY5 protein, ArabidopsisNuclear ProteinsUbiquitin-Protein Ligases

Identifiers

PMID16829591
PMCPMC1533968
OpenAlexW2167222308

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.