Evidence map›Paper›PMID 16827936›Full record

ArticleReproductive biology and endocrinology : RB&E2006

Identification of differential gene expression in in vitro FSH treated pig granulosa cells using suppression subtractive hybridization.

A Bonnet, P O Frappart, P Dehais, G Tosser-Klopp, F Hatey

Open access · goldAbstract readComparative Study
In one paragraph

Article in Reproductive biology and endocrinology : RB&E, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

  1. Actions and Roles of FSH in Germinative Cells.International journal of molecular sciences · 2021
    Review
  2. Article
  3. Article
  4. Article
  5. Advances in swine transcriptomics.International journal of biological sciences · 2007
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

A BonnetINRA laboratoire de Génétique cellulaire, BP52627 chemin de borde rouge, 31326 Castanet cedex, France. abonnet@toulouse.inra.fr
P O Frappart
P Dehais
G Tosser-Klopp
F Hatey
Laboratoire de Génétique Cellulaire · FRInstitut National de la Recherche Agronomique · MASt. Jude Children's Research Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

FSH, which binds to specific receptors on granulosa cells in mammals, plays a key role in folliculogenesis. Its biological activity involves stimulation of intercellular communication and upregulation of steroidogenesis, but the entire spectrum of the genes regulated by FSH has yet to be fully characterized. In order to find new regulated transcripts, however rare, we have used a Suppression Subtractive Hybridization approach (SSH) on pig granulosa cells in primary culture treated or not with FSH. Two SSH libraries were generated and 76 clones were sequenced after selection by differential screening. Sixty four different sequences were identified, including 3 novel sequences. Experiments demonstrated the presence of 25 regulated transcripts.A gene ontology analysis of these 25 genes revealed (1) catalytic; (2) transport; (3) signal transducer; (4) binding; (5) anti-oxidant and (6) structural activities. These findings may deepen our understanding of FSH's effects. Particularly, they suggest that FSH is involved in the modulation of peroxidase activity and remodelling of chromatin.

Indexed as

Subtraction TechniqueAnimalsBlotting, NorthernCells, CulturedChromosome MappingDNA, ComplementaryFemaleFollicle Stimulating HormoneGene Expression ProfilingGene Expression RegulationGene LibraryGranulosa CellsNucleic Acid HybridizationReceptors, FSHReverse Transcriptase Polymerase Chain ReactionSequence Analysis, DNADNA, ComplementaryFollicle Stimulating HormoneReceptors, FSH

Identifiers

PMID16827936
PMCPMC1533831
OpenAlexW2119572649

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.