ArticleJournal of clinical microbiology2006
Identification of bacteria in formalin-fixed, paraffin-embedded heart valve tissue via 16S rRNA gene nucleotide sequencing.
Article in Journal of clinical microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
23 citing papers in PubMed.
- Early coconut oil exposure suppresses chronic experimental Crohn's disease via myristic acid and enhanced regulatory T cells.Nature communications · 2026Article
- Microbiological investigation of pregnancies following vaginal radical trachelectomy using 16S rRNA sequencing of FFPE placental specimens.FEBS open bio · 2024Article
- Fusobacteria alterations are associated with colorectal cancer liver metastasis and a poor prognosis.Oncology letters · 2024Article
- Prognostic and clinicopathological significance of Fusobacterium nucleatum in colorectal cancer: a systemic review and meta-analysis.Journal of pathology and translational medicine · 2022Article
- Application of Amplicon-Based Targeted NGS Technology for Diagnosis of Drug-Resistant Tuberculosis Using FFPE Specimens.Microbiology spectrum · 2022Article
- Accuracy and Clinical Relevance of Intra-TumoralDiagnostics (Basel, Switzerland) · 2022Article
- Molecular diagnosis of alveolar echinococcosis in patients based on frozen and formalin-fixed paraffin-embedded tissue samples.Parasite (Paris, France) · 2022Article
- Evaluation of the Use of Formalin-Fixed and Paraffin-Embedded Archive Gastric Tissues for Microbiota Characterization Using Next-Generation Sequencing.International journal of molecular sciences · 2020Article
- Cosmopolitan Distribution ofFrontiers in microbiology · 2020Article
- Pembrolizumab for anaplastic thyroid cancer: a case study.Cancer immunology, immunotherapy : CII · 2019Article
- The presence of bacteria varies between colorectal adenocarcinomas, precursor lesions and non-malignant tissue.BMC cancer · 2019Article
- Microbiota Profile and Impact ofFrontiers in oncology · 2019Article
- Dissemination of cfr-mediated linezolid resistance among Staphylococcus species isolated from a teaching hospital in Beijing, China.The Journal of international medical research · 2018Article
- Characterization of the gut microbiome in epidemiologic studies: the multiethnic cohort experience.Annals of epidemiology · 2016Review
- SIV/SHIV Infection Triggers Vascular Inflammation, Diminished Expression of Krüppel-like Factor 2 and Endothelial Dysfunction.The Journal of infectious diseases · 2016Article
- Stereomicroscopic 3D-pattern profiling of murine and human intestinal inflammation reveals unique structural phenotypes.Nature communications · 2015Article
- Osteomyelitis of the patella caused by Legionella anisa.Journal of clinical microbiology · 2013Article
- PCR-electrospray ionization mass spectrometry for direct detection of pathogens and antimicrobial resistance from heart valves in patients with infective endocarditis.Journal of clinical microbiology · 2013Article
- Clinical, epidemiologic, histopathologic and molecular features of an unexplained dermopathy.PloS one · 2012Article
- Rapid, simultaneous detection of Clostridium sordellii and Clostridium perfringens in archived tissues by a novel PCR-based microsphere assay: diagnostic implications for pregnancy-associated toxic shock syndrome cases.Infectious diseases in obstetrics and gynecology · 2012Article
Corrections and comments
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Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We applied 16S rRNA gene sequencing to identify bacterial species present in formalin-fixed, paraffin-embedded heart valve tissue. In 40% (12/30) of the cases, we were able to identify the bacterium to the species-genus level. For more recent cases (<or=4 years), the success rate was significantly improved, to 70% (P<0.001).
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Registered trials
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