Evidence map›Paper›PMID 16825380›Full record

ArticleJournal of clinical microbiology2006

Multilocus variable-number tandem-repeat analysis for investigation of Clostridium difficile transmission in Hospitals.

Jane W Marsh, Mary M O'Leary, Kathleen A Shutt, A William Pasculle, Stuart Johnson, Dale N Gerding, Carlene A Muto, Lee H Harrison

Abstract readEvaluation StudyValidation Study
In one paragraph

Article in Journal of clinical microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. Trial
  2. Ribotypes and New Virulent Strains Across Europe.Advances in experimental medicine and biology · 2024
    Review
  3. Review
  4. Article
  5. Comparison of trends inThe Lancet regional health. Europe · 2022
    Article
  6. Genetic Relatedness of 5-Year Isolates ofAntibiotics (Basel, Switzerland) · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. African journal of laboratory medicine · 2018
    Article
  11. Article
  12. Article
  13. Management of a cluster ofAntimicrobial resistance and infection control · 2017
    Article
  14. Characterisation of Clostridium difficile strains isolated from Groote Schuur Hospital, Cape Town, South Africa.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2016
    Article
  15. Genome-Based Infection Tracking Reveals Dynamics of Clostridium difficile Transmission and Disease Recurrence.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2016
    Article
  16. Development and evaluation of double locus sequence typing for molecular epidemiological investigations of Clostridium difficile.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2016
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jane W MarshInfectious Diseases Epidemiology Research Unit, University of Pittsburgh School of Medicine and Medical Center, Division of Hospital Epidemiology and Infection Control, 865 Scaife Hall, 3550 Terrace Street, Pittsburgh, PA 15261, USA. marshj@dom.pitt.edu
Mary M O'Leary
Kathleen A Shutt
A William Pasculle
Stuart Johnson
Dale N Gerding
Carlene A Muto
Lee H Harrison

Funding

Shedding of HIV In Semen Despite Antiretroviral TherapyK24AI052788 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HARRISON, LEE H · 2002 to 2012
$1.4M
NIAID NIH HHS K24 AI052788NIAID NIH HHS K24 AI52788
6 · The paper itself

Abstract

Clostridium difficile is a major cause of antibiotic-associated gastrointestinal illness. Recently, an increased incidence of hospital-acquired infections with severe outcomes has been reported in North America and Europe. Current molecular-typing methods for detection of outbreaks and nosocomial transmission are labor-intensive, subjective, or insufficiently discriminatory to differentiate between closely related strains. This report describes the development of multilocus variable-number tandem-repeat (VNTR) analysis (MLVA) for molecular subtyping of C. difficile. Seven VNTR loci were identified from the C. difficile 630 genome by screening an isolate collection of various restriction endonuclease analysis (REA) types. The stability of the loci for short-term epidemiologic investigations was determined by performing MLVA on consecutive isolates of the same REA type from individual patients collected over as many as 90 days. Validation of MLVA for molecular genotyping was performed by direct comparison with REA results obtained from Hines Veterans Affairs Hospital on a combined collection of 40 C. difficile isolates from two different sources. The ability of MLVA to detect outbreaks was demonstrated on a collection of tertiary-care hospital isolates from a defined C. difficile outbreak in 2001. MLVA successfully clustered C. difficile isolates of the same REA type and discriminated isolates of unique REA type. Thus, MLVA is an objective, portable genotyping method that permits reliable detection of C. difficile outbreaks and can aid epidemiologic investigations of nosocomial transmission.

Indexed as

Bacterial Typing TechniquesMinisatellite RepeatsClostridioides difficileCross InfectionDNA, BacterialEnterocolitis, PseudomembranousEvolution, MolecularGenotypeHumansMolecular EpidemiologyProhibitinsRestriction MappingDNA, BacterialPHB2 protein, humanProhibitins

Identifiers

PMID16825380
PMCPMC1489528

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.