Evidence map›Paper›PMID 16822981›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2006

Nedd4-WW domain-binding protein 5 (Ndfip1) is associated with neuronal survival after acute cortical brain injury.

Qian Sang, Mary H Kim, Sharad Kumar, Nicole Bye, Maria C Morganti-Kossman, Jenny Gunnersen, Stephanie Fuller, Jason Howitt, Lavinia Hyde, Tim Beissbarth and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 56 citations in OpenAlex.

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  11. The Transcellular Propagation and Intracellular Trafficking of α-Synuclein.Cold Spring Harbor perspectives in medicine · 2017
    Review
  12. Engineered Exosomes as Vehicles for Biologically Active Proteins.Molecular therapy : the journal of the American Society of Gene Therapy · 2017
    Article
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  16. Ndfip1 mediates peripheral tolerance to self and exogenous antigen by inducing cell cycle exit in responding CD4+ T cells.Proceedings of the National Academy of Sciences of the United States of America · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Qian SangHoward Florey Institute, The University of Melbourne, Parkville, Victoria 3010, Australia.
Mary H Kim
Sharad Kumar
Nicole Bye
Maria C Morganti-Kossman
Jenny Gunnersen
Stephanie Fuller
Jason Howitt
Lavinia Hyde
Tim Beissbarth
Hamish S Scott
John Silke
Seong-Seng Tan
Walter and Eliza Hall Institute of Medical Research · AUFlorey Institute of Neuroscience and Mental Health · AUSouth Australia Pathology · AUMonash University · AUUniversity of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the transcriptional response to neuronal injury after trauma is a necessary prelude to formulation of therapeutic strategies. We used Serial Analysis of Gene Expression (SAGE) to identify 50,000 sequence tags representing 18,000 expressed genes in the cortex 2 h after traumatic brain injury (TBI). A similar tag library was obtained from sham-operated cortex. The SAGE data were validated on biological replicates using quantitative real-time-PCR on multiple samples at 2, 6, 12, and 24 h after TBI. This analysis revealed that the vast majority of genes showed a downward trend in their pattern of expression over 24 h. This was confirmed for a subset of genes using in situ hybridization and immunocytochemistry on brain sections. Of the overexpressed genes in the trauma library, Nedd4-WW (neural precursor cell expressed, developmentally downregulated) domain-binding protein 5 (N4WBP5) (also known as Ndfip1) is strongly expressed in surviving neurons around the site of injury. Overexpression of N4WBP5 in cultured cortical neurons increased the number of surviving neurons after gene transfection and growth factor starvation compared with control transfections. These results identify N4WBP5 as a neuroprotective protein and, based on its known interaction with the ubiquitin ligase Nedd4, would suggest protein ubiquitination as a possible survival strategy in neuronal injury.

Indexed as

Acute DiseaseAnimalsApoptosisBrain InjuriesCarrier ProteinsCell SurvivalCerebral CortexGene Expression ProfilingGene LibraryIntercellular Signaling Peptides and ProteinsMaleMembrane ProteinsMiceMice, Inbred C57BLNerve Growth FactorsNeuronsCarrier ProteinsIntercellular Signaling Peptides and ProteinsMembrane ProteinsNdfip1 protein, mouseNerve Growth FactorsUbiquitin

Identifiers

PMID16822981
PMCPMC6673957
OpenAlexW2151993274

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.