Evidence map›Paper›PMID 16820681›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2006

Crystallization and preliminary X-ray crystallographic analysis of the Escherichia coli outer membrane cobalamin transporter BtuB in complex with the carboxy-terminal domain of TonB.

David D Shultis, Michael D Purdy, Christian N Banchs, Michael C Wiener

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In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

David D ShultisDepartment of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, Virginia 22908, USA.
Michael D Purdy
Christian N Banchs
Michael C Wiener
University of Virginia · US

Funding

STRUCTURAL BIOLOGY OF BACTERIAL COBALAMIN TRANSPORTR01DK059999 · NIDDK · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI WIENER, MICHAEL · 2001 to 2005
$1.3M
NIDDK NIH HHS DK59999NIDDK NIH HHS R01 DK059999NIGMS NIH HHS T32 GM00Z055
6 · The paper itself

Abstract

The energy-dependent uptake of organometallic compounds and other micronutrients across the outer membranes of Gram-negative bacteria is carried out by outer membrane active-transport proteins that utilize the proton-motive force of the inner membrane via coupling to the TonB protein. The Escherichia coli outer membrane cobalamin transporter BtuB and a carboxy-terminal domain of the TonB protein, residues 147-239 of the wild-type protein, were expressed and purified individually. A complex of BtuB and TonB(147-239) was formed in the presence of the substrate cyanocobalamin (CN-Cbl; vitamin B12) and calcium and was crystallized. BtuB was purified in the detergent LDAO (n-dodecyl-N,N-dimethylamine-N-oxide) and the complex was formed in a detergent mixture of LDAO and C8E4 (tetraethylene glycol monooctylether). Crystals were obtained by sitting-drop vapor diffusion, with the reservoir containing 30%(v/v) polyethylene glycol (PEG 300) and 100 mM sodium acetate pH 5.2. The crystals belong to space group P2(1)2(1)2(1) (unit-cell parameters a = 74.3, b = 82.4, c = 122.6 angstroms). The asymmetric unit consists of a single BtuB-TonB complex. Data sets have been collected to 2.1 angstroms resolution at a synchrotron beamline (APS SER-CAT 22-ID).

Indexed as

Bacterial Outer Membrane ProteinsBinding SitesCalciumCrystallizationCrystallography, X-RayEscherichia coli ProteinsMembrane ProteinsMembrane Transport ProteinsPeptide FragmentsRecombinant Fusion ProteinsVitamin B 12Bacterial Outer Membrane ProteinsBtuB protein, E coliCalciumEscherichia coli ProteinsMembrane ProteinsMembrane Transport ProteinsPeptide FragmentsRecombinant Fusion ProteinstonB protein, E coliVitamin B 12

Identifiers

PMID16820681
PMCPMC2242962
OpenAlexW2065070087

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.