Evidence map›Paper›PMID 16820454›Full record

ArticleApplied and environmental microbiology2006

Helicobacter anseris sp. nov. and Helicobacter brantae sp. nov., isolated from feces of resident Canada geese in the greater Boston area.

James G Fox, Nancy S Taylor, Shelly Howe, Michele Tidd, Shilu Xu, Bruce J Paster, Floyd E Dewhirst

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 42 citations in OpenAlex.

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  5. High-ThroughputFrontiers in microbiology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

James G FoxDivision of Comparative Medicine, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Bldg. 16, Rm. 825C, Cambridge, MA 02139, USA. jgfox@mit.edu
Nancy S Taylor
Shelly Howe
Michele Tidd
Shilu Xu
Bruce J Paster
Floyd E Dewhirst
Massachusetts Institute of Technology · US

Funding

Biologic Basis of Refractory Periodontal DiseaseR01DE011443 · NIDCR · FORSYTH INSTITUTE · PI PASTER, BRUCE J · 1997 to 2006
$6.5M
POSTDOCTORAL TRAINING IN COMPARATIVE MEDICINET32RR007036 · NCRR · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FOX, JAMES G · 1988 to 2011
$3.6M
HELIOBACTER INDUCED HEPATITIS AND TUMORIGENESISR01CA067529 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FOX, JAMES G · 1995 to 2009
$3.2M
CULTIVABLE &UNCULTIVABLE PERIODONTAL SPIROCHETESR01DE010374 · NIDCR · FORSYTH INSTITUTE · PI DEWHIRST, FLOYD E · 1992 to 2003
$1.9M
GENE THERAPY FOR TREATMENT OF AUTOIMMUNE DISEASESK08AI001509 · NIAID · AMERICAN NATIONAL RED CROSS · PI MELO, MARCO · 1998 to 2001
$181k
NCI NIH HHS CA067529NCI NIH HHS R01 CA067529NCRR NIH HHS RR007036NCRR NIH HHS T32 RR007036NIAID NIH HHS AI0150952NIDCR NIH HHS DE10374NIDCR NIH HHS DE11443NIDCR NIH HHS R01 DE010374NIDCR NIH HHS R01 DE011443
6 · The paper itself

Abstract

Numbers of nonmigratory Canada geese have increased substantially in the past decade, and they have become a nuisance in some urban areas. Because of their close contact with humans in parks and areas adjacent to surface waterways, contact with their feces poses a zoonotic risk. A total of 97 geese from 10 separate geographic locales in the greater Boston area had their feces sampled for detection of Helicobacter spp. Identification of Helicobacter spp. based on 16S rRNA genus-specific helicobacter primers was noted in 39 of 97 (40.2%) DNA fecal extracts. Twenty-seven (27.8%) of these geese had helicobacters isolated from their feces. A urease-positive novel species, Helicobacter anseris, based on phenotypic, biochemical, and 16S rRNA analyses, was isolated from 20 geese from seven different flocks. A second, novel, urease-negative Helicobacter sp., H. brantae, was identified in seven geese. Four geese had both novel Helicobacter spp. cultured from their feces. Whether these two novel helicobacters pose a zoonotic risk, similar to other enteric helicobacters (e.g., H. canadensis, previously isolated from diarrheic and bacteremic humans and from geese in Europe), will require further studies.

Indexed as

AnimalsBacterial Typing TechniquesBird DiseasesBostonFecesGeeseGenes, rRNAHelicobacterMolecular Sequence DataPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 23SSequence Analysis, DNARNA, Ribosomal, 16SRNA, Ribosomal, 23S

Identifiers

PMID16820454
PMCPMC1489354
OpenAlexW2066632213

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.