Evidence map›Paper›PMID 16816180›Full record

ArticleJournal of bacteriology2006

Limited role for the DsrA and RprA regulatory RNAs in rpoS regulation in Salmonella enterica.

Amy M Jones, Adam Goodwill, Thomas Elliott

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Advances in sRNA-mediated regulation ofFrontiers in cellular and infection microbiology · 2025
    Review
  3. Article
  4. Article
  5. Small RNA-based feedforward loop with AND-gate logic regulates extrachromosomal DNA transfer in Salmonella.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Amy M JonesDepartment of Microbiology, Immunology and Cell Biology, West Virginia University Health Sciences Center, Morgantown, WV 26506, USA.
Adam Goodwill
Thomas Elliott
West Virginia University · US

Funding

Post-transcriptional regulation of RpoS synthesisR01GM063616 · NIGMS · WEST VIRGINIA UNIVERSITY · PI ELLIOTT, THOMAS A. · 2003 to 2006
$894k
NIGMS NIH HHS GM63616NIGMS NIH HHS R01 GM063616
6 · The paper itself

Abstract

RpoS, the sigma factor of enteric bacteria that responds to stress and stationary phase, is subject to complex regulation acting at multiple levels, including transcription, translation, and proteolysis. Increased translation of rpoS mRNA during growth at low temperature, after osmotic challenge, or with a constitutively activated Rcs phosphorelay depends on two trans-acting small regulatory RNAs (sRNAs) in Escherichia coli. The DsrA and RprA sRNAs are both highly conserved in Salmonella enterica, as is their target, an inhibitory antisense element within the rpoS untranslated leader. Analysis of dsrA and rprA deletion mutants indicates that while the increased translation of RpoS in response to osmotic challenge is conserved in S. enterica, dependence on these two sRNA regulators is much reduced. Furthermore, low-temperature growth or constitutive RcsC activation had only modest effects on RpoS expression, and these increases were, respectively, independent of dsrA or rprA function. This lack of conservation of sRNA function suggests surprising flexibility in RpoS regulation.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsBase SequenceConserved SequenceKineticsMolecular Sequence DataNucleic Acid ConformationRNA, AntisenseRNA, BacterialRNA, Small CytoplasmicRNA, Small UntranslatedRNA, UntranslatedSalmonella entericaSigma FactorBacterial ProteinsDsrA RNA, E coliRNA, AntisenseRNA, BacterialRNA, Small CytoplasmicRNA, Small UntranslatedRNA, UntranslatedSigma Factorsigma factor KatF protein, Bacteria

Identifiers

PMID16816180
PMCPMC1539969
OpenAlexW2143073748

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.