Evidence map›Paper›PMID 16816001›Full record

ArticleGenes & development2006

Drosophila ribosomal proteins are associated with linker histone H1 and suppress gene transcription.

Jian-Quan Ni, Lu-Ping Liu, Daniel Hess, Jens Rietdorf, Fang-Lin Sun

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 87 citations in OpenAlex.

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  9. LC-MS Based Draft Map of theFrontiers in plant science · 2021
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  11. Functional Diversity of Non-Histone Chromosomal Protein HmgB1.International journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jian-Quan NiFriedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Lu-Ping Liu
Daniel Hess
Jens Rietdorf
Fang-Lin Sun
Friedrich Miescher Institute · CHTsinghua University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dynamics and function of ribosomal proteins in the cell nucleus remain enigmatic. Here we provide evidence that specific components of Drosophila melanogaster ribosomes copurify with linker histone H1. Using various experimental approaches, we demonstrate that this association of nuclear ribosomal proteins with histone H1 is specific, and that colocalization occurs on condensed chromatin in vivo. Chromatin immunoprecipitation analysis confirmed that specific ribosomal proteins are associated with chromatin in a histone H1-dependent manner. Overexpression of either histone H1 or ribosomal protein L22 in Drosophila cells resulted in global suppression of the same set of genes, while depletion of H1 and L22 caused up-regulation of tested genes, suggesting that H1 and ribosomal proteins are essential for transcriptional gene repression. Overall, this study provides evidence for a previously undefined link between ribosomal proteins and chromatin, and suggests a role for this association in transcriptional regulation in higher eukaryotes.

Indexed as

Transcription, GeneticAmino Acid SequenceAnimalsCell NucleusChromatinChromatin ImmunoprecipitationDrosophila melanogasterDrosophila ProteinsGene Expression RegulationHistonesMolecular Sequence DataRibosomal ProteinsRNARNA-Binding ProteinsChromatinDrosophila ProteinsHistonesRibosomal ProteinsRNARNA-Binding ProteinsRpL22 protein, DrosophilaRpL7 protein, Drosophila

Identifiers

PMID16816001
PMCPMC1522087
OpenAlexW2079343928

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.