Evidence map›Paper›PMID 16810321›Full record

ArticleThe EMBO journal2006

Combinatorial control of Arabidopsis proline dehydrogenase transcription by specific heterodimerisation of bZIP transcription factors.

Fridtjof Weltmeier, Andrea Ehlert, Caroline S Mayer, Katrin Dietrich, Xuan Wang, Katia Schütze, Rosario Alonso, Klaus Harter, Jesús Vicente-Carbajosa, Wolfgang Dröge-Laser

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 245 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Overexpression of the Transcription FactorInternational journal of molecular sciences · 2025
    Article
  5. The Proline Dehydrogenase GeneInternational journal of molecular sciences · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Genome-Wide Analysis of C/S1-bZIP Subfamilies inInternational journal of molecular sciences · 2024
    Article
  10. Article
  11. Article
  12. Systematic Identification and Functional Analysis of theInternational journal of molecular sciences · 2023
    Article
  13. Article
  14. Review
  15. Article
  16. International journal of molecular sciences · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. Association mapping uncovers maizeFrontiers in plant science · 2022
    Article

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Fridtjof WeltmeierAlbrecht-von-Haller Institut, Universität Göttingen, Göttingen, Germany.
Andrea Ehlert
Caroline S Mayer
Katrin Dietrich
Xuan Wang
Katia Schütze
Rosario Alonso
Klaus Harter
Jesús Vicente-Carbajosa
Wolfgang Dröge-Laser
University of Göttingen · DEUniversidad Politécnica de Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proline metabolism has been implicated in plant responses to abiotic stresses. The Arabidopsis thaliana proline dehydrogenase (ProDH) is catalysing the first step in proline degradation. Transcriptional activation of ProDH by hypo-osmolarity is mediated by an ACTCAT cis element, a typical binding site of basic leucine zipper (bZIP) transcription factors. In this study, we demonstrate by gain-of-function and loss-of-function approaches, as well as chromatin immunoprecipitation (ChIP), that ProDH is a direct target gene of the group-S bZIP factor AtbZIP53. Dimerisation studies making use of yeast and Arabidopsis protoplast-based two-hybrid systems, as well as bimolecular fluorescence complementation (BiFC) reveal that AtbZIP53 does not preferentially form dimers with group-S bZIPs but strongly interacts with members of group-C. In particular, a synergistic interplay of AtbZIP53 and group-C AtbZIP10 was demonstrated by colocalisation studies, strong enhancement of ACTCAT-mediated transcription as well as complementation studies in atbzip53 atbzip10 T-DNA insertion lines. Heterodimer mediated activation of transcription has been found to operate independent of the DNA-binding properties and is described as a crucial mechanism to modulate transcription factor activity and function.

Indexed as

ArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsDimerizationGene Expression Regulation, PlantMutationOsmolar ConcentrationProline OxidasePromoter Regions, GeneticRegulatory Elements, TranscriptionalTranscriptional ActivationYeastsArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsProline Oxidase

Identifiers

PMID16810321
PMCPMC1500977
OpenAlexW2162501026

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.