Evidence map›Paper›PMID 16809303›Full record

ArticleJournal of virology2006

The L4 22-kilodalton protein plays a role in packaging of the adenovirus genome.

Philomena Ostapchuk, Mary E Anderson, Sharanya Chandrasekhar, Patrick Hearing

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
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  6. An efficient peptide-based ELISA for differentiating fowl adenovirus 4-infected chickens from vaccinated chickens.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2021
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Components of Adenovirus Genome Packaging.Frontiers in microbiology · 2016
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Philomena OstapchukDepartment of Molecular Genetics and Microbiology, School of Medicine, Stony Brook University, NY 11794, USA.
Mary E Anderson
Sharanya Chandrasekhar
Patrick Hearing
Stony Brook University · US

Funding

ADENOVIRUS AS A VECTOR FOR GENE THERAPYR01AI041636 · NIAID · STATE UNIVERSITY NEW YORK STONY BROOK · PI HEARING, PATRICK · 1997 to 2011
$3.6M
NIAID NIH HHS AI041636NIAID NIH HHS R01 AI041636
6 · The paper itself

Abstract

Packaging of the adenovirus (Ad) genome into a capsid is absolutely dependent upon the presence of a cis-acting region located at the left end of the genome referred to as the packaging domain. The functionally significant sequences within this domain consist of at least seven similar repeats, referred to as the A repeats, which have the consensus sequence 5' TTTG-N(8)-CG 3'. In vitro and in vivo binding studies have demonstrated that the adenovirus protein IVa2 binds to the CG motif of the packaging sequences. In conjunction with IVa2, another virus-specific protein binds to the TTTG motifs in vitro. The efficient formation of these protein-DNA complexes in vitro was precisely correlated with efficient packaging activity in vivo. We demonstrate that the binding activity to the TTTG packaging sequence motif is the product of the L4 22-kDa open reading frame. Previously, no function had been ascribed to this protein. Truncation of the L4 22-kDa protein in the context of the viral genome did not reduce viral gene expression or viral DNA replication but eliminated the production of infectious virus. We suggest that the L4 22-kDa protein, in conjunction with IVa2, plays a critical role in the recognition of the packaging domain of the Ad genome that leads to viral DNA encapsidation. The L4 22-kDa protein is also involved in recognition of transcription elements of the Ad major late promoter.

Indexed as

AdenoviridaeBase SequenceCapsidGenome, ViralHeLa CellsHumansOpen Reading FramesPromoter Regions, GeneticProtein BindingRepetitive Sequences, Nucleic AcidSequence DeletionViral ProteinsVirus Assemblyiva2 protein, adenovirusViral Proteins

Identifiers

PMID16809303
PMCPMC1489068
OpenAlexW2164440528

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.