Evidence map›Paper›PMID 16809293›Full record

ArticleJournal of virology2006

Experimental confirmation of global murine cytomegalovirus open reading frames by transcriptional detection and partial characterization of newly described gene products.

Qiyi Tang, Eain A Murphy, Gerd G Maul

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

  1. Decoding murine cytomegalovirus.PLoS pathogens · 2023
    Article
  2. Article
  3. Mouse CytomegalovirusFrontiers in cellular and infection microbiology · 2020
    Article
  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Qiyi TangThe Wistar Institute, 3601 Spruce Street, Philadelphia, PA 19104, USA.
Eain A Murphy
Gerd G Maul
The Wistar Institute · USPrinceton University · US

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Luis J Montaner · 1985 to 2026
$75.9M
EARLY INTERACTIONS OF DNA VIRUSES AND HOSTR01AI041136 · NIAID · WISTAR INSTITUTE · PI MAUL, GERD G · 1998 to 2005
$1.8M
Early interactions of DNA viruses and hostR56AI041136 · NIAID · WISTAR INSTITUTE · PI KAUFMAN, RUSSEL E. · 2008 to 2009
$828k
EARLY INTERACTIONS OF DNA VIRUSES AND HOSTR21AI041136 · NIAID · WISTAR INSTITUTE · PI MAUL, GERD G · 1997 to 1997
–
VIRUS DNA TARGETING MECHANISM--THE TARGETR21GM057599 · NIGMS · WISTAR INSTITUTE · PI MAUL, GERD G · 1998 to 1999
–
NCI NIH HHS CA-10815NCI NIH HHS P30 CA010815NIAID NIH HHS AI 41136NIAID NIH HHS R01 AI041136NIAID NIH HHS R56 AI041136NIGMS NIH HHS GM 57599
6 · The paper itself

Abstract

Murine cytomegalovirus (MCMV) and human CMV (HCMV) share many features making the mouse system a potential small-animal model for HCMV. Although the genomic DNA sequence and the predicted open reading frames (ORFs) of MCMV have been determined, experimental evidence that the ORFs are actually transcribed has been lacking. We developed an MCMV global-DNA microarray that includes all previously predicted ORFs and 14 potential ones. A total of 172 ORFs were confirmed to be transcribed, including 7 newly discovered ORFs not previously predicted. No gene products from 10 previously predicted ORFs were detected by either DNA microarray analysis or reverse transcriptase PCR in MCMV-infected mouse fibroblasts, although 2 of those were expressed in a macrophage cell line, suggesting that potential gene products from these open reading frames are silenced in fibroblasts and required in macrophages. Immunohistochemical localization of the six newly described ORF products and three recently identified ones in cells transfected with the respective construct revealed four of the products in the nucleus and five in mitochondria. Analysis of two ORFs using site-directed mutagenesis showed that deletion of one of the mitochondrion-localized gene products led to significantly decreased replication in fibroblasts.

Indexed as

AnimalsCell NucleusCytomegalovirusGene Expression ProfilingGene SilencingGenes, ViralHumansImmunohistochemistryMiceMitochondriaMuromegalovirusNIH 3T3 CellsOligonucleotide Array Sequence AnalysisOpen Reading FramesTranscription, GeneticVirus Replication

Identifiers

PMID16809293
PMCPMC1489029
OpenAlexW2111968412

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.