Evidence map›Paper›PMID 16802858›Full record

ArticlePLoS biology2006

Metazoan Scc4 homologs link sister chromatid cohesion to cell and axon migration guidance.

Vlad C Seitan, Peter Banks, Steve Laval, Nazia A Majid, Dale Dorsett, Amer Rana, Jim Smith, Alex Bateman, Sanja Krpic, Arnd Hostert and 7 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 106 citations in OpenAlex.

  1. Article
  2. Article
  3. Cohesin organizes 3D DNA contacts surrounding active enhancers inbioRxiv : the preprint server for biology · 2024
    Article
  4. Article
  5. The Green Valley ofCells · 2022
    Review
  6. Article
  7. Review
  8. MaizeThe Plant cell · 2019
    Article
  9. Review
  10. Article
  11. New insights into cohesin loading.Current genetics · 2018
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Cohesin's role in pluripotency and reprogramming.Cell cycle (Georgetown, Tex.) · 2016
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 9 institutions in 4 countries.

Vlad C SeitanInstitute of Human Genetics, University of Newcastle, Newcastle upon Tyne, United Kingdom.
Peter Banks
Steve Laval
Nazia A Majid
Dale Dorsett
Amer Rana
Jim Smith
Alex Bateman
Sanja Krpic
Arnd Hostert
Robert A Rollins
Hediye Erdjument-Bromage
Paul Tempst
Claire Y Benard
Siegfried Hekimi
Sarah F Newbury
Tom Strachan
Newcastle University · GBErasmus MC · NLMcGill University · CAMemorial Sloan Kettering Cancer Center · USCornell University · USSaint Louis University · USWellcome/Cancer Research UK Gurdon Institute · GBWellcome Sanger Institute · GBWellcome Trust · GB

Funding

LONG DISTANCE ENHANCER-PROMOTER INTERACTIONSR01GM055683 · NIGMS · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI DORSETT, DALE L · 1998 to 2012
$3.5M
Gene Activation by Remote Transcriptional EnhancersR01GM063403 · NIGMS · SAINT LOUIS UNIVERSITY · PI DORSETT, DALE L · 2001 to 2004
$978k
Biotechnology and Biological Sciences Research Council BB/C005163/1NIGMS NIH HHS R01 GM055683NIGMS NIH HHS R01 GM063403Wellcome Trust 087656
6 · The paper itself

Abstract

Saccharomyces cerevisiae Scc2 binds Scc4 to form an essential complex that loads cohesin onto chromosomes. The prevalence of Scc2 orthologs in eukaryotes emphasizes a conserved role in regulating sister chromatid cohesion, but homologs of Scc4 have not hitherto been identified outside certain fungi. Some metazoan orthologs of Scc2 were initially identified as developmental gene regulators, such as Drosophila Nipped-B, a regulator of cut and Ultrabithorax, and delangin, a protein mutant in Cornelia de Lange syndrome. We show that delangin and Nipped-B bind previously unstudied human and fly orthologs of Caenorhabditis elegans MAU-2, a non-axis-specific guidance factor for migrating cells and axons. PSI-BLAST shows that Scc4 is evolutionarily related to metazoan MAU-2 sequences, with the greatest homology evident in a short N-terminal domain, and protein-protein interaction studies map the site of interaction between delangin and human MAU-2 to the N-terminal regions of both proteins. Short interfering RNA knockdown of human MAU-2 in HeLa cells resulted in precocious sister chromatid separation and in impaired loading of cohesin onto chromatin, indicating that it is functionally related to Scc4, and RNAi analyses show that MAU-2 regulates chromosome segregation in C. elegans embryos. Using antisense morpholino oligonucleotides to knock down Xenopus tropicalis delangin or MAU-2 in early embryos produced similar patterns of retarded growth and developmental defects. Our data show that sister chromatid cohesion in metazoans involves the formation of a complex similar to the Scc2-Scc4 interaction in the budding yeast. The very high degree of sequence conservation between Scc4 homologs in complex metazoans is consistent with increased selection pressure to conserve additional essential functions, such as regulation of cell and axon migration during development.

Indexed as

Cell MovementAnimalsAxonsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell CycleCell Cycle ProteinsChromatidsChromosomal Proteins, Non-HistoneChromosome SegregationConserved SequenceDNA-Binding ProteinsDrosophilaDrosophila ProteinsHeLa CellsHumansCaenorhabditis elegans ProteinsCell Cycle ProteinsChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDrosophila ProteinsIntercellular Signaling Peptides and ProteinsMau-2 protein, C elegansMAU2 protein, humanNIPBL protein, humannipped-B protein, DrosophilaPQN-85 protein, C elegansProteinsSaccharomyces cerevisiae ProteinsSCC2 protein, S cerevisiaeSCC4 protein, S cerevisiae

Identifiers

PMID16802858
PMCPMC1484498
OpenAlexW1992476706

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.