Evidence map›Paper›PMID 16798798›Full record

ArticleBiophysical journal2006

Structural change in lipid bilayers and water penetration induced by shock waves: molecular dynamics simulations.

Kenichiro Koshiyama, Tetsuya Kodama, Takeru Yano, Shigeo Fujikawa

Abstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Overview of Therapeutic Ultrasound Applications and Safety Considerations: 2024 Update.Journal of ultrasound in medicine : official journal of the American Institute of Ultrasound in Medicine · 2025
    Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Extracorporeal Acoustic Wave Therapy and Multiple Symmetric Lipomatosis.Plastic and reconstructive surgery. Global open · 2015
    Article
  16. Article
  17. Article
  18. Article
  19. Bursting bubbles and bilayers.Theranostics · 2012
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kenichiro KoshiyamaDivision of Mechanical and Space Engineering, Hokkaido University, Sapporo, Japan.
Tetsuya Kodama
Takeru Yano
Shigeo Fujikawa

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The structural change of a phospholipid bilayer in water under the action of a shock wave is numerically studied with unsteady nonequilibrium molecular dynamics simulations. The action of shock waves is modeled by the momentum change of water molecules, and thereby we demonstrate that the resulting collapse and rebound of the bilayer are followed by the penetration of water molecules into the hydrophobic region of the bilayer. The high-speed phenomenon that occurs during the collapse and rebound of the bilayer is analyzed in detail, particularly focusing on the change of bilayer thickness, the acyl chain bend angles, the lateral fluidity of lipid molecules, and the penetration rate of water molecules. The result shows that the high-speed phenomenon can be divided into two stages: in the first stage the thickness of bilayer and the order parameter are rapidly reduced, and then in the second stage they are recovered relatively slowly. It is in the second stage that water molecules are steadily introduced into the hydrophobic region. The penetration of water molecules is enhanced by the shock wave impulse and this qualitatively agrees with a recent experimental result.

Indexed as

Membrane FluidityModels, BiologicalModels, Chemical1,2-DipalmitoylphosphatidylcholineBiomechanical PhenomenaCell Membrane PermeabilityComputer SimulationHigh-Energy Shock WavesLasersLipid BilayersMolecular ConformationPressureThermodynamicsWater1,2-DipalmitoylphosphatidylcholineLipid BilayersWater

Identifiers

PMID16798798
PMCPMC1557557

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.