Evidence map›Paper›PMID 16791616›Full record

ArticleHuman genetics2006

An angiotensin converting enzyme haplotype predicts survival in patients with end stage renal disease.

James B Wetmore, Kirsten L Johansen, Saunak Sen, Adriana M Hung, David H Lovett

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Angiotensin-related genetic determinants of cardiovascular disease in patients undergoing hemodialysis.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2019
    Trial
  2. Review
  3. Observational
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

James B WetmoreThe Department of Medicine, San Francisco VAMC/University of California, San Francisco, CA 94121, USA. jwetmore@kumc.edu
Kirsten L Johansen
Saunak Sen
Adriana M Hung
David H Lovett
San Francisco VA Medical Center · USUniversity of California, San Francisco · USUniversity of California System · US

Funding

Academic Training Program in NephrologyT32DK007219 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HSU, CHI-YUAN · 1986 to 2022
$7.3M
Pathology of Renal Matrix MetabolismR01DK039776 · NIDDK · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI LOVETT, DAVID H · 1987 to 2009
$3.0M
ANABOLIC STEROIDS AND EXERCISE IN HEMODIALYSISR01DK056182 · NIDDK · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI JOHANSEN, KIRSTEN L · 1999 to 2002
$907k
Pathobiology of Renal Matrix MetabolismR56DK039776 · NIDDK · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI LOVETT, DAVID H · 2005 to 2005
$83k
NIDDK NIH HHS DK07219NIDDK NIH HHS DK39776NIDDK NIH HHS DK56182NIDDK NIH HHS T32 DK007219
6 · The paper itself

Abstract

The renin-angiotensin system is implicated in the development of a variety of human diseases. Many studies have sought to characterize the clinical implications of polymorphisms in the angiotensin converting enzyme (ACE) gene. Given the high mortality rate of individuals on chronic hemodialysis (HD), we sought to investigate whether genetic diversity in the ACE gene correlates with mortality in this population. We assembled a racially diverse cohort of prevalent individuals on chronic outpatient HD, and followed it prospectively for a mean of 2.1 years. Subjects were genotyped for seven single nucleotide polymorphisms (SNPs) in the ACE gene. Haplotype probabilities were calculated using an expectation-maximization algorithm. Cox proportional hazards regression was used to determine associations between haplotype and time to mortality from initiation of HD. There was strong linkage disequilibrium (LD) across the ACE gene, with three tagging SNPs found to account for all seven-SNP haplotypes that had a frequency of greater than 4%. After adjustment for age, race, gender, and diabetes status, a three-locus haplotype was associated with a 72% risk reduction in mortality (P = 0.004). The majority of this association was captured by the TT genotype of A-239T promoter polymorphism. The TGG (non-wild-type) haplotype, consisting of three tagging SNPs in the ACE gene, is associated with significantly decreased risk of all-cause mortality in HD patients independent of age, race, gender, and diabetic status. This "protective" haplotype may encompass loci with functional significance in the ACE gene.

Indexed as

Polymorphism, Single NucleotideAgedCohort StudiesDiabetes MellitusFemaleHaplotypesHumansKidney Failure, ChronicLinkage DisequilibriumMaleMiddle AgedPeptidyl-Dipeptidase APolymorphism, GeneticProspective StudiesRenal DialysisSurvival AnalysisPeptidyl-Dipeptidase A

Identifiers

PMID16791616
OpenAlexW2106758928

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.