Evidence map›Paper›PMID 16790776›Full record

ArticleInfection and immunity2006

Role of sigma E-regulated genes in Escherichia coli uropathogenesis.

Peter Redford, Rodney A Welch

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Xenobiotic Effects of Chlorine Dioxide toFrontiers in microbiology · 2020
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Peter RedfordDept. of Medical Microbiology & Immunology, Rm. 481 MSB, 1300 University Ave., Madison, WI 53706-1532, USA.
Rodney A Welch
University of Wisconsin–Madison · US

Funding

D-serine/DsdCXA Control of E. coli UropathogenesisR01DK063250 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI WELCH, RODNEY A. · 2003 to 2013
$3.3M
VIRUL FACTORS OF UROPATH ESCHERICHIA COLIK08AI001583 · NIAID · UNIVERSITY OF WISCONSIN MADISON · PI REDFORD, PETER · 1999 to 2003
$426k
D-serine/DsdCXA Control of E coli UropathogenesisR56DK063250 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI WELCH, RODNEY A. · 2008 to 2008
$298k
NIAID NIH HHS K08 AI01583NIDDK NIH HHS DK63250NIDDK NIH HHS R01 DK063250NIDDK NIH HHS R56 DK063250
6 · The paper itself

Abstract

The sigma E regulon encodes proteins for maintenance and repair of the Escherichia coli cell envelope. Previously, we observed that an antirepressor of sigma E, DegS, is essential for uropathogenic E. coli virulence. Here we use a mouse urinary tract infection model to assay the virulence of mutants of E. coli genes described as sigma E dependent. Deletion mutants of candidate genes were made in the uropathogenic E. coli strain CFT073. Swiss Webster female mice were inoculated with a mixture of mutant and wild-type strains. Bladder and kidney homogenates were cultured 2 days after infection, and CFU of the wild type and mutant were compared. Eleven mutants were assayed, and two, CFT073 degP and CFT073 skp, showed significantly diminished survival compared to wild type. DegP is a chaperone and degradase active in the periplasm. Skp is also a periplasmic chaperone. The virulence of the skp deletion mutant could not be restored by complementation with skp. The virulence of the degP deletion mutant, in contrast, could be restored. However, complementation with a degP allele encoding a serine-to-alanine (S210A) mutation at the protease active site fails to restore virulence. Unlike degP mutants in other bacteria, the E. coli degP mutant is tolerant of oxidative stress. It disappears abruptly from bladder and kidney cultures between 6 and 12 hours after inoculation. A mutant of degQ, a close homolog of degP, was not attenuated in mice. This is the first report that the DegP degradase is an E. coli virulence factor in an animal infection model.

Indexed as

Genes, BacterialAnimalsBase SequenceDisease Models, AnimalEscherichia coliEscherichia coli InfectionsFemaleGene Expression Regulation, BacterialMiceSequence DeletionSigma FactorTranscription FactorsUrinary Tract InfectionsUrotheliumSigma Factorsporulation-specific sigma factorsTranscription Factors

Identifiers

PMID16790776
PMCPMC1489677
OpenAlexW2124395493

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.