Evidence map›Paper›PMID 16788188›Full record

ArticleJournal of bacteriology2006

Protein-protein interactions among Helicobacter pylori cag proteins.

Valerie J Busler, Victor J Torres, Mark S McClain, Oscar Tirado, David B Friedman, Timothy L Cover

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Species-specific components of theInfection and immunity · 2025
    Article
  3. Article
  4. Roles of the components of theFuture microbiology · 2024
    Review
  5. Role of the CagY antenna projection inInfection and immunity · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. mBio · 2019
    Article
  11. Article
  12. Prevalence of CagA and antimicrobial sensitivity ofInfectious agents and cancer · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Valerie J BuslerDepartment of Microbiology and Immunology, Division of Infectious Diseases, A2200 Medical Center North, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.
Victor J Torres
Mark S McClain
Oscar Tirado
David B Friedman
Timothy L Cover
Vanderbilt University · US

Funding

Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
CELLULAR AND MOLECULAR MICROBIOLOGY TRAINING PROGRAMT32AI007611 · NIAID · VANDERBILT UNIVERSITY · PI HAWIGER, JACK J · 1999 to 2010
$1.6M
H. Pylory factors associated with peptic ulcer diseaseR01DK053623 · NIDDK · VANDERBILT UNIVERSITY · PI COVER, TIMOTHY L · 1997 to 2006
$1.3M
NIAID NIH HHS 5 T32 AI07611-05NIAID NIH HHS T32 AI007611NIDDK NIH HHS 5P30 DK58404NIDDK NIH HHS P30 DK058404NIDDK NIH HHS R01 DK053623NIDDK NIH HHS R01 DK53623
6 · The paper itself

Abstract

Many Helicobacter pylori isolates contain a 40-kb region of chromosomal DNA known as the cag pathogenicity island (PAI). The risk for development of gastric cancer or peptic ulcer disease is higher among humans infected with cag PAI-positive H. pylori strains than among those infected with cag PAI-negative strains. The cag PAI encodes a type IV secretion system that translocates CagA into gastric epithelial cells. To identify Cag proteins that are expressed by H. pylori during growth in vitro, we compared the proteomes of a wild-type H. pylori strain and an isogenic cag PAI deletion mutant using two-dimensional difference gel electrophoresis (2D-DIGE) in multiple pH ranges. Seven Cag proteins were identified by this approach. We then used a yeast two-hybrid system to detect potential protein-protein interactions among 14 Cag proteins. One heterotypic interaction (CagY/7 with CagX/8) and two homotypic interactions (involving H. pylori VirB11/ATPase and Cag5) were similar to interactions previously reported to occur among homologous components of the Agrobacterium tumefaciens type IV secretion system. Other interactions involved Cag proteins that do not have known homologues in other bacterial species. Biochemical analysis confirmed selected interactions involving five of the proteins that were identified by 2D-DIGE. Protein-protein interactions among Cag proteins are likely to have an important role in the assembly of the H. pylori type IV secretion apparatus.

Indexed as

Biological TransportGenomic IslandsAdenosine TriphosphatasesAntigens, BacterialBacterial ProteinsCell Line, TumorElectrophoresis, Gel, Two-DimensionalHelicobacter InfectionsHelicobacter pyloriHumansMutationProtein BindingProtein Interaction MappingProteomeAdenosine TriphosphatasesAntigens, BacterialBacterial ProteinscagA protein, Helicobacter pyloriProteome

Identifiers

PMID16788188
PMCPMC1482994
OpenAlexW2030033182

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.