Evidence map›Paper›PMID 16786298›Full record

ArticlePlant molecular biology2006

AtRLI2 is an endogenous suppressor of RNA silencing.

Cecilia Sarmiento, Lenne Nigul, Jekaterina Kazantseva, Marju Buschmann, Erkki Truve

Abstract read
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Article in Plant molecular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 49 citations in OpenAlex.

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  9. ABCE Proteins: From Molecules to Development.Frontiers in plant science · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Cecilia SarmientoDepartment of Gene Technology, Tallinn University of Technology, Estonia. cecilia.sarmiento@ttu.ee
Lenne Nigul
Jekaterina Kazantseva
Marju Buschmann
Erkki Truve
National Institute of Chemical Physics and Biophysics · EETallinn University of Technology · EE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA silencing is a mechanism involved in gene regulation during development and anti-viral defense in plants and animals. Although many viral suppressors of this mechanism have been described up to now, this is not the case for endogenous suppressors. We have identified a novel endogenous suppressor in plants: RNase L inhibitor (RLI) of Arabidopsis thaliana. RLI is a very conserved protein among eukaryotes and archaea. It was first known as component of the interferon-induced mammalian 2'-5' oligoadenylate (2-5A) anti-viral pathway. This protein is in several organisms responsible for essential functions, which are not related to the 2-5A pathway, like ribosome biogenesis and translation initiation. Arabidopsis has two RLI paralogs. We have described in detail the expression pattern of one of these paralogs (AtRLI2), which is ubiquitously expressed in all plant organs during different developmental stages. Infiltrating Nicotiana benthamiana green fluorescent protein (GFP)-transgenic line with Agrobacterium strains harboring GFP and AtRLI2, we proved that AtRLI2 suppresses silencing at the local and at the systemic level, reducing drastically the amount of GFP small interfering RNAs.

Indexed as

Gene Expression Regulation, PlantRNA InterferenceArabidopsisArabidopsis ProteinsATP-Binding Cassette TransportersGreen Fluorescent ProteinsNicotianaPlants, Genetically ModifiedRNA, MessengerRNA, Small InterferingTransgenesArabidopsis ProteinsAt4g19210 protein, ArabidopsisATP-Binding Cassette TransportersGreen Fluorescent ProteinsRNA, MessengerRNA, Small Interfering

Identifiers

PMID16786298
OpenAlexW2062040901

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.