Evidence map›Paper›PMID 16782869›Full record

ArticleMolecular and cellular biology2006

Regulation of mating and filamentation genes by two distinct Ste12 complexes in Saccharomyces cerevisiae.

Song Chou, Shelley Lane, Haoping Liu

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed.

  1. Article
  2. Article
  3. Kar4 acts as a Ste12 regulator inbioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. mSphere · 2024
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Mutations inJournal of fungi (Basel, Switzerland) · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Song ChouDepartment of Biological Chemistry, University of California-Irvine, Irvine, CA 92697-1700, USA.
Shelley Lane
Haoping Liu

Funding

REGULATION OF FILAMENTOUS GROWTH IN YEASTR01GM055155 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI LIU, HAOPING · 1997 to 2013
$4.1M
NIGMS NIH HHS GM55155NIGMS NIH HHS R01 GM055155
6 · The paper itself

Abstract

The Saccharomyces cerevisiae transcription factor Ste12 controls two distinct developmental programs of mating and filamentation. Ste12 activity is regulated by Fus3 and Kss1 mitogen-activated protein kinases through two Ste12 inhibitors, Dig1 and Dig2. Mating genes are regulated by Ste12 through Ste12 binding sites (pheromone response elements [PREs]), whereas filamentation genes are supposedly regulated by the cooperative binding of Ste12 and Tec1 on a PRE adjacent to a Tec1-binding site (TCS), termed filamentous responsive element (FRE). However, most filamentation genes do not contain an FRE; instead, they all have a TCS. By immunoprecipitation, we show that Ste12 forms two distinct complexes, Ste12/Dig1/Dig2 and Tec1/Ste12/Dig1, both in vivo and in vitro. The two complexes are formed by the competitive binding of Tec1 and Dig2 with Ste12, as Tec1 can compete off Dig2 from Ste12 in vitro and in vivo. In the Tec1/Ste12/Dig1 complex, Tec1 binds to the N terminus of Ste12 and to Dig1 indirectly through Ste12. Tec1 has low basal activity, and its transcriptional activation is provided by the associated Ste12, which is under Dig1 inhibition. Filamentation genes are bound by the Tec1/Ste12/Dig1 complex, whereas mating genes are occupied by mostly Ste12/Dig1/Dig2 with some Tec1/Ste12/Dig1. We suggest that Tec1 tethers Ste12 to TCS elements upstream of filamentation genes and defines the filamentation genes as a subset of Ste12-regulated genes.

Indexed as

Gene Expression Regulation, DevelopmentalGene Expression Regulation, FungalGenes, Mating Type, FungalBinding, CompetitiveChromatin ImmunoprecipitationDNA-Binding ProteinsPromoter Regions, GeneticResponse ElementsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsTranscription, GeneticDIG1 protein, S cerevisiaeDIG2 protein, S cerevisiaeDNA-Binding ProteinsSaccharomyces cerevisiae ProteinsSTE12 protein, S cerevisiaeTEC1 protein, S cerevisiaeTranscription Factors

Identifiers

PMID16782869
PMCPMC1489142

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.