Evidence map›Paper›PMID 16779282›Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2005

A pilot bridging data integration and analytics: BioMediator and R?

S Jeng, K Wang, J Barbero, J Brinkley, P Tarczy-Hornoch

Abstract read
PubMed Full text at PMC
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Evaluation of semantic-based information retrieval methods in the autism phenotype domain.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2011
    Article
  2. Issues in biomedical research data management and analysis: needs and barriers.Journal of the American Medical Informatics Association : JAMIA
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

S JengDepts of Medical Education and Biomedical Informatics, University of WA, USA.
K Wang
J Barbero
J Brinkley
P Tarczy-Hornoch

Funding

STRUCTURAL INFORMATION FRAMEWORK FOR BRAIN MAPPINGR01DC002310 · NIDCD · UNIVERSITY OF WASHINGTON · PI BRINKLEY, JAMES F · 1994 to 2006
$2.5M
GENESEEK: DATA INTEGRATION SYSTEM FOR GENETIC DATABASESR01HG002288 · NHGRI · UNIVERSITY OF WASHINGTON · PI TARCZY-HORNOCH, PETER · 2000 to 2005
$2.0M
Interdisciplinary Center for Structural InformaticsP20LM007714 · NLM · UNIVERSITY OF WASHINGTON · PI BRINKLEY, JAMES F · 2003 to 2005
$1.9M
NHGRI NIH HHS R01 HG002288NHGRI NIH HHS R01HG02288NIDCD NIH HHS MH/DC02310NIDCD NIH HHS R01 DC002310NLM NIH HHS P20 LM007714NLM NIH HHS P20LM007714
6 · The paper itself

Abstract

Biological research today involves aggregating and analyzing large amounts of data from disparate sources. Tools such as the University of Washington's BioMediator system integrate heterogeneous data. Analytic packages such as the R environment have a rich set of tools to analyze biomedical research data. Our pilot project bridged data integration and analytics in a general way by successfully incorporating the BioMediator system into the R platform for specific analyses on neurophysiologic research data.

Indexed as

Computational BiologyNeurophysiologyBrainHumansInformation Storage and RetrievalLanguagePilot ProjectsSoftwareSystems Integration

Identifiers

PMID16779282
PMCPMC1560535

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.