ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2005
BioMediator data integration: beyond genomics to neuroscience data.
Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
9 citing papers in PubMed.
- JBioWH: an open-source Java framework for bioinformatics data integration.Database : the journal of biological databases and curation · 2013Article
- Learning virulent proteins from integrated query networks.BMC bioinformatics · 2012Article
- Integration of Neuroimaging and Microarray Datasets through Mapping and Model-Theoretic Semantic Decomposition of Unstructured Phenotypes.Cancer informatics · 2009Article
- Slim-prim: a biomedical informatics database to promote translational research.Perspectives in health information managemen · 2009Article
- Spatiotemporal integration of molecular and anatomical data in virtual reality using semantic mapping.International journal of nanomedicine · 2009Article
- Ontologies for bioinformatics.Bioinformatics and biology insights · 2008Article
- A pilot bridging data integration and analytics: BioMediator and R?AMIA ... Annual Symposium proceedings. AMIA Symposium · 2005Article
- Automated database mediation using ontological metadata mappings.Journal of the American Medical Informatics Association : JAMIAArticle
- semCDI: a query formulation for semantic data integration in caBIG.Journal of the American Medical Informatics Association : JAMIAArticle
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
Abstract
The BioMediator system developed at the University of Washington (UW) provides a theoretical and practical foundation for data integration across diverse biomedical research domains and various data types. In this paper we demonstrate the generalizability of its architecture through its application to the UW Human Brain Project (HBP) for understanding language organization in the brain. We first describe the system architecture and the characteristics of the four data sources developed by the UW HBP. Second we present the process of developing the application prototype for HBP neuroscience researchers posing queries across these semantically and syntactically heterogeneous neurophysiologic data sources. Then we discuss the benefits and potential limitations of the BioMediator system as a general data integration solution for different user groups in genomic and neuroscience research domains.
Indexed as
Identifiers
16779146PMC1560529What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.