ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2005
Of mice and men: aligning mouse and human anatomies.
Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
25 citing papers in PubMed.
- Bridging mouse and human anatomies; a knowledge-based approach to comparative anatomy for disease model phenotyping.Mammalian genome : official journal of the International Mammalian Genome Society · 2023Review
- Article
- Extending import detection algorithms for concept import from two to three biomedical terminologies.BMC medical informatics and decision making · 2020Article
- A review of auditing techniques for the Unified Medical Language System.Journal of the American Medical Informatics Association : JAMIA · 2020Review
- The Applicability of Mouse Models to the Study of Human Disease.Methods in molecular biology (Clifton, N.J.) · 2019Article
- ALS Genetics, Mechanisms, and Therapeutics: Where Are We Now?Frontiers in neuroscience · 2019Review
- Biomedical ontology alignment: an approach based on representation learning.Journal of biomedical semantics · 2018Article
- Experiences from the anatomy track in the ontology alignment evaluation initiative.Journal of biomedical semantics · 2017Review
- Matching disease and phenotype ontologies in the ontology alignment evaluation initiative.Journal of biomedical semantics · 2017Article
- Anatomy Ontology Matching Using Markov Logic Networks.Scientifica · 2016Article
- Completing the is-a structure in light-weight ontologies.Journal of biomedical semantics · 2015Article
- Evaluation of research in biomedical ontologies.Briefings in bioinformatics · 2013Article
- A unified approach for debugging is-a structure and mappings in networked taxonomies.Journal of biomedical semantics · 2013Article
- Matching arthropod anatomy ontologies to the Hymenoptera Anatomy Ontology: results from a manual alignment.Database : the journal of biological databases and curation · 2013Article
- Computational tools for comparative phenomics: the role and promise of ontologies.Mammalian genome : official journal of the International Mammalian Genome Society · 2012Review
- Towards valid and reusable reference alignments - ten basic quality checks for ontology alignments and their application to three different reference data sets.Journal of biomedical semantics · 2012Article
- The mouse-human anatomy ontology mapping project.Database : the journal of biological databases and curation · 2012Article
- GOMMA: a component-based infrastructure for managing and analyzing life science ontologies and their evolution.Journal of biomedical semantics · 2011Article
- Creating mappings for ontologies in biomedicine: simple methods work.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2009Article
- Ontology Matching with Semantic Verification.Web semantics (Online) · 2009Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
Abstract
This paper reports on the alignment between mouse and human anatomies, a critical resource for comparative science as diseases in mice are used as mod-els of human disease. The two ontologies under investigation are the NCI Thesaurus (human anatomy) and the Adult Mouse Anatomical Dictionary, each comprising about 2500 anatomical concepts. This study compares two approaches to aligning ontologies. One is fully automatic, based on a combination of lexical and structural similarity; the other is manual. The resulting mappings were evaluated by an expert. 715 and 781 mappings were identified by each method respectively, of which 639 are common to both and all valid. The applications of the map-ping are discussed from the perspective of biology and from that of ontology.
Indexed as
Identifiers
16779002PMC1560846What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.