Evidence map›Paper›PMID 16775305›Full record

ArticleRNA (New York, N.Y.)2006

Ribosomal protein S1 promotes transcriptional cycling.

Maxim V Sukhodolets, Susan Garges, Sankar Adhya

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in RNA (New York, N.Y.), 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 56 citations in OpenAlex.

  1. Extraribosomal Functions of Bacterial Ribosomal Proteins-An Update, 2023.International journal of molecular sciences · 2024
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  18. Functional Importance of Mobile Ribosomal Proteins.BioMed research international · 2015
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Maxim V SukhodoletsDepartment of Chemistry and Physics, Lamar University, Beaumont, Texas 77710, USA. soukhodomv@hal.lamar.edu
Susan Garges
Sankar Adhya
Lamar University · USNational Cancer Institute · USNational Institute of Allergy and Infectious Diseases · US

Funding

Regulation of Gene TranscriptionZIABC008751 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI ADHYA, SANKAR · 2009 to 2025
$24.3M
REGULATION OF THE GAL REGULON OF ESCHERICHIA COLIZ01BC008751 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI ADHYA, SANKAR · 1996 to 2008
$3.1M
6 · The paper itself

Abstract

Prokaryotic RNA polymerases are capable of efficient, continuous synthesis of RNA in vivo, yet purified polymerase-DNA model systems for RNA synthesis typically produce only a limited number of catalytic turnovers. Here, we report that the ribosomal protein S1--which plays critical roles in translation initiation and elongation in Escherichia coli and is believed to stabilize mRNA on the ribosome--is a potent activator of transcriptional cycling in vitro. Deletion of the two C-terminal RNA-binding modules--out of a total of six loosely homologous RNA-binding modules present in S1--resulted in a near-loss of the ability of S1 to enhance transcription, whereas disruption of the very last C-terminal RNA-binding module had only a mild effect. We propose that, in vivo, cooperative interaction of multiple RNA-binding modules in S1 may enhance the transcript release from RNA polymerase, alleviating its inhibitory effect and enabling the core enzyme for continuous reinitiation of transcription.

Indexed as

Transcription, GeneticAmino Acid SequenceDNA-Directed RNA PolymerasesEscherichia coliEscherichia coli ProteinsHoloenzymesIn Vitro TechniquesModels, BiologicalProtein BiosynthesisRibosomal ProteinsRibosomesRNA, BacterialSequence DeletionDNA-Directed RNA PolymerasesEscherichia coli ProteinsHoloenzymesRibosomal Proteinsribosomal protein S1RNA, Bacterial

Identifiers

PMID16775305
PMCPMC1524893
OpenAlexW2101775695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.