Evidence map›Paper›PMID 16766523›Full record

ArticleThe Journal of biological chemistry2006

Translation initiation factor eIF4G-1 binds to eIF3 through the eIF3e subunit.

Aaron K LeFebvre, Nadejda L Korneeva, Marjan Trutschl, Urska Cvek, Roy D Duzan, Christopher A Bradley, John W B Hershey, Robert E Rhoads

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 168 citations in OpenAlex.

  1. Review
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  7. Remodelled ribosomal populations synthesize a specific proteome in proliferating plant tissue during cold.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  8. Article
  9. Review
  10. Computational inference of eIF4F complex function and structure in human cancers.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  20. Review

42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Aaron K LeFebvreDepartment of Biochemistry and Molecular Biology and Research Core Facility, Louisiana State University Health Sciences Center, Shreveport, Louisiana 71130, USA.
Nadejda L Korneeva
Marjan Trutschl
Urska Cvek
Roy D Duzan
Christopher A Bradley
John W B Hershey
Robert E Rhoads
Louisiana State University in Shreveport · USUniversity of California, Davis · USLouisiana State University Health Sciences Center Shreveport · US

Funding

REGULATION OF OVALBUMIN SYNTHESIS IN CHICK OVIDUCTR01GM020818 · NIGMS · UNIVERSITY OF KENTUCKY · PI RHOADS, ROBERT E. · 1985 to 2009
$3.5M
MECHANISM OF INITIATION OF PROTEIN BIOSYNTHESISR01GM022135 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI HERSHEY, JOHN W · 1985 to 2004
$1.8M
A SOLID STATE NMR INVESTIGATION OF BACTERIORHODOPSINF32GM020818 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI MCMAHON, MICHAEL T · 2001 to 2002
$79k
NIGMS NIH HHS F32 GM020818NIGMS NIH HHS GM20818NIGMS NIH HHS GM22135NIGMS NIH HHS R01 GM020818NIGMS NIH HHS R01 GM022135
6 · The paper itself

Abstract

eIF3 in mammals is the largest translation initiation factor ( approximately 800 kDa) and is composed of 13 nonidentical subunits designated eIF3a-m. The role of mammalian eIF3 in assembly of the 48 S complex occurs through high affinity binding to eIF4G. Interactions of eIF4G with eIF4E, eIF4A, eIF3, poly(A)-binding protein, and Mnk1/2 have been mapped to discrete domains on eIF4G, and conversely, the eIF4G-binding sites on all but one of these ligands have been determined. The only eIF4G ligand for which this has not been determined is eIF3. In this study, we have sought to identify the mammalian eIF3 subunit(s) that directly interact(s) with eIF4G. Established procedures for detecting protein-protein interactions gave ambiguous results. However, binding of partially proteolyzed HeLa eIF3 to the eIF3-binding domain of human eIF4G-1, followed by high throughput analysis of mass spectrometric data with a novel peptide matching algorithm, identified a single subunit, eIF3e (p48/Int-6). In addition, recombinant FLAG-eIF3e specifically competed with HeLa eIF3 for binding to eIF4G in vitro. Adding FLAG-eIF3e to a cell-free translation system (i) inhibited protein synthesis, (ii) caused a shift of mRNA from heavy to light polysomes, (iii) inhibited cap-dependent translation more severely than translation dependent on the HCV or CSFV internal ribosome entry sites, which do not require eIF4G, and (iv) caused a dramatic loss of eIF4G and eIF2alpha from complexes sedimenting at approximately 40 S. These data suggest a specific, direct, and functional interaction of eIF3e with eIF4G during the process of cap-dependent translation initiation, although they do not rule out participation of other eIF3 subunits.

Indexed as

AlgorithmsAnimalsCell-Free SystemEukaryotic Initiation Factor-3Eukaryotic Initiation Factor-4GHeLa CellsHumansInsectaProtein BindingProtein BiosynthesisProtein Structure, TertiaryRecombinant ProteinsRibosomesSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationEukaryotic Initiation Factor-3Eukaryotic Initiation Factor-4GRecombinant Proteins

Identifiers

PMID16766523
PMCPMC1880881
OpenAlexW2028022492

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.