Evidence map›Paper›PMID 16765445›Full record

ArticleMolecular immunology2007

Positive regulatory domain I-binding factor 1 mediates repression of the MHC class II transactivator (CIITA) type IV promoter.

Han Chen, Carolyn A Gilbert, John A Hudson, Sophia C Bolick, Kenneth L Wright, Janet F Piskurich

Open access · greenAbstract read
In one paragraph

Article in Molecular immunology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Functions of RANKL/RANK/OPG in bone modeling and remodeling.Archives of biochemistry and biophysics · 2008
    Review
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Han ChenDivision of Basic Medical Sciences, Mercer University School of Medicine, 1550 College St., Macon, GA 31207, USA.
Carolyn A Gilbert
John A Hudson
Sophia C Bolick
Kenneth L Wright
Janet F Piskurich
Mercer University · USMoffitt Cancer Center · USUniversity of South Florida · US

Funding

PRDI-BF1 and histone methyltransferase in lymphomaR01CA114504 · NCI · H. LEE MOFFITT CANCER CTR &RES INST · PI WRIGHT, KENNETH LYNN · 2005 to 2009
$1.2M
Induction of CIITA expression in B cells and myelomaR01CA102203 · NCI · MERCER UNIVERSITY MACON · PI MAYOROV, VLADIMIR · 2003 to 2006
$971k
NCI NIH HHS R01 CA102203NCI NIH HHS R01CA102203NCI NIH HHS R01 CA102203-03NCI NIH HHS R01 CA114504NCI NIH HHS R01CA114504
6 · The paper itself

Abstract

MHC class II transactivator (CIITA), a co-activator that controls MHC class II (MHC II) transcription, functions as the master regulator of MHC II expression. Persistent activity of the CIITA type III promoter (pIII), one of the four potential promoters of this gene, is responsible for constitutive expression of MHC II by B lymphocytes. In addition, IFN-gamma induces expression of CIITA in these cells through the type IV promoter (pIV). Positive regulatory domain 1-binding factor 1 (PRDI-BF1), called B lymphocyte-induced maturation protein 1 (Blimp-1) in mice, represses the expression of CIITA pIII in plasma and multiple myeloma cells. To investigate regulation of CIITA pIV expression by PRDI-BF1 in the B lymphocyte lineage, protein/DNA-binding studies, and functional promoter analyses were performed. PRDI-BF1 bound to the IFN regulatory factor-element (IRF-E) site in CIITA pIV. Ectopic expression of either PRDI-BF1 or Blimp-1 repressed this promoter in B lymphocytes. In vitro binding and functional analyses of CIITA pIV demonstrated that the IRF-E is the target of this repression. In vivo genomic footprint analysis demonstrated protein binding at the IRF-E site of CIITA pIV in U266 myeloma cells, which express PRDI-BF1. PRDI-BF1beta, a truncated form of PRDI-BF1 that is co-expressed in myeloma cells, also bound to the IRF-E site and repressed CIITA pIV. These findings demonstrate for the first time that, in addition to silencing expression of CIITA pIII in B lymphocytes, PRDI-BF1 is capable of binding and suppressing CIITA pIV.

Indexed as

Base SequenceB-LymphocytesCell LineCell Line, TumorDown-RegulationHumansMolecular Sequence DataNuclear ProteinsPositive Regulatory Domain I-Binding Factor 1Promoter Regions, GeneticProtein BindingRepressor ProteinsTrans-ActivatorsTranscription FactorsMHC class II transactivator proteinNuclear ProteinsPositive Regulatory Domain I-Binding Factor 1PRDM1 protein, humanRepressor ProteinsTrans-ActivatorsTranscription Factors

Identifiers

PMID16765445
PMCPMC1987354
OpenAlexW2018549754

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.