Evidence map›Paper›PMID 16763025›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2006

Splice-site A choice targets plasma-membrane Ca2+-ATPase isoform 2 to hair bundles.

Jennifer K Hill, Diane E Williams, Meredith LeMasurier, Rachel A Dumont, Emanuel E Strehler, Peter G Gillespie

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 68 citations in OpenAlex.

  1. CaProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Alternative splicing in shaping the molecular landscape of the cochlea.Frontiers in cell and developmental biology · 2023
    Review
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  20. Apical localization of PMCA2w/b is enhanced in terminally polarized MDCK cells.Biochemical and biophysical research communications · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jennifer K HillOregon Hearing Research Center, Vollum Institute, Oregon Health & Science University, Portland, Oregon 97239, USA.
Diane E Williams
Meredith LeMasurier
Rachel A Dumont
Emanuel E Strehler
Peter G Gillespie
Vollum Institute · USMayo Clinic · US

Funding

Hair-Bundle ProteinsR01DC002368 · NIDCD · OREGON HEALTH & SCIENCE UNIVERSITY · PI Peter Gordon Barr-Gillespie · 1994 to 2026
$11.3M
PURIFICATION AND PROPERTIES OF CA2+ PUMPING ATPASER01GM028835 · NIGMS · MAYO CLINIC ROCHESTER · PI STREHLER, EMANUEL ERNST · 1986 to 2006
$1.8M
ROLE OF CALCIUM PUMPING IN HAIR-BUNDLE FUNCTIONR01DC004571 · NIDCD · OREGON HEALTH AND SCIENCE UNIVERSITY · PI GILLESPIE, PETER GORDON · 2000 to 2004
$1.2M
Spectral-shape discrimination with cochlear prosthesesF32DC005893 · NIDCD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DRENNAN, WARD R · 2003 to 2004
$102k
NIDCD NIH HHS P30 DC005893NIGMS NIH HHS R01 GM028835NIGMS NIH HHS R01 GM28835
6 · The paper itself

Abstract

Localization of mechanotransduction in sensory hair cells to hair bundles requires selective targeting of essential proteins to specific locations. Isoform 2 of the plasma-membrane Ca2+-ATPase (PMCA2), required for hearing and balance, is found exclusively in hair bundles. We determined the contribution of splicing at the two major splicing sites (A and C) to hair-cell targeting of PMCA2. When PMCA2 isoforms were immunoprecipitated from purified hair bundles of rat utricle, 2w was the only site A variant detected; moreover, immunocytochemistry for 2w in rat vestibular and cochlear tissues indicated that this splice form was located solely in bundles. To demonstrate the necessity of the 2w sequence, we transfected hair cells with PMCA2 containing different variants at splice sites A and C. Although native hair bundles exclusively use the 2a form at splice-site C, epitope-tagged PMCA2w/a and PMCA2w/b were both concentrated in bundles, indicating that site C is not involved in bundle targeting. In contrast, PMCA2z/a was excluded from bundles and was instead targeted to the basolateral plasma membrane. Bundle-specific targeting of PMCA2w/a tagged with green fluorescent protein (GFP) was diminished, suggesting that GFP interfered with splice-site A. Together, these data demonstrate that PMCA2w/a is the hair-bundle isoform of PMCA in rat hair cells and that 2w targets PMCA2 to bundles. The 2w sequence is thus the first targeting signal identified for a hair-bundle membrane protein; moreover, the striking distribution of inner-ear PMCA isoforms dictated by selective targeting suggests a critical functional role for segregated pathways of Ca2+ transport.

Indexed as

Alternative SplicingGene TargetingAnimalsCalcium-Transporting ATPasesCation Transport ProteinsChlorocebus aethiopsCOS CellsEar, InnerGenetic VariationGreen Fluorescent ProteinsHair Cells, AuditoryImmunohistochemistryImmunoprecipitationIn Vitro TechniquesPlasma Membrane Calcium-Transporting ATPasesRatsAtp2b2 protein, ratCalcium-Transporting ATPasesCation Transport ProteinsGreen Fluorescent ProteinsPlasma Membrane Calcium-Transporting ATPases

Identifiers

PMID16763025
PMCPMC2204085
OpenAlexW2130813711

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.