Evidence map›Paper›PMID 16757585›Full record

ArticleJournal of clinical microbiology2006

Identification of mycobacteria by matrix-assisted laser desorption ionization-time-of-flight mass spectrometry.

Michelle Pignone, Kimberly M Greth, Jason Cooper, David Emerson, Jane Tang

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it, 171 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Article
  4. Article
  5. Rapid and Accurate Differentiation ofFrontiers in cellular and infection microbiology · 2022
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  13. Characterization and Differentiation ofFrontiers in cellular and infection microbiology · 2017
    Article
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  15. Review
  16. Article
  17. Implementation of MALDI-TOF MS technology for the identification of clinical isolates of Mycobacterium spp. in mycobacterial diagnosis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2015
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Michelle PignoneBacteriology Program, American Type Culture Collection, 10801 University Blvd., Manassas, Virginia 20110, USA.
Kimberly M Greth
Jason Cooper
David Emerson
Jane Tang
American Type Culture Collection · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Classical methods for identification of Mycobacterium species rely on morphology and biochemical profiles. Speciation of a Mycobacterium isolate using these standard methods is a lengthy process based on subjective data interpretation. In this study, Mycobacterium species were characterized by utilizing matrix-assisted laser desorption ionization-time-of-flight mass spectrometry (MALDI-TOF MS). This technology is designed to provide a characteristic mass spectral fingerprint based on desorbed ions from the cell surface. Thirty-seven strains were analyzed; these represented thirteen species and five subspecies that included the Mycobacterium tuberculosis complex and the M. avium-M. intracellulare complex, as well as rapid- and slow-growing mycobacteria. All 37 strains were analyzed in triplicate, and a database was generated. This method produced species-specific patterns for all but 1 of the 37 isolates and provided reliable differentiation at the strain level. The data suggest that whole-cell MALDI-TOF MS has potential as a rapid and reproducible method for the identification and characterization of Mycobacterium species.

Indexed as

Bacterial Typing TechniquesAnimalsHumansMycobacteriumMycobacterium avium ComplexMycobacterium InfectionsMycobacterium tuberculosisReproducibility of ResultsSpecies SpecificitySpectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Identifiers

PMID16757585
PMCPMC1489414
OpenAlexW2150068612

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.