Evidence map›Paper›PMID 16757573›Full record

ArticleNucleic acids research2006

Nitric oxide activation of Erk1/2 regulates the stability and translation of mRNA transcripts containing CU-rich elements.

Shuibang Wang, Jianhua Zhang, Stephanie Theel, Jennifer J Barb, Peter J Munson, Robert L Danner

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 26 citations in OpenAlex.

  1. Current drug discovery technologies · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Shuibang WangCritical Care Medicine Department, Clinical Center, National Institutes of Health, Bethesda, MD 20892, USA.
Jianhua Zhang
Stephanie Theel
Jennifer J Barb
Peter J Munson
Robert L Danner
National Institutes of Health Clinical Center · US

Funding

Statistical And Computational Methods For Gene Expression and Proteomic AnalysisZIACT000266 · CIT · CENTER FOR INFORMATION TECHNOLOGY · PI MUNSON, PETER J · 2009 to 2016
$4.2M
Statistical &Computational Methods For Gene ExpressionZ01CT000266 · CIT · COMPUTER RESEARCH AND TECHNOLOGY · PI MUNSON, PETER J · 1998 to 2008
$1.3M
The Functional Genomics Of Critical IlnessZ01CL001164 · CLC · CLINICAL CENTER · PI DANNER, ROBERT L · 2000 to 2008
$258k
Role of Nitric Oxide in Regulating Inflammation and Gene ExpressionZ01CL001158 · CLC · CLINICAL CENTER · PI DANNER, ROBERT L · 1999 to 2008
$189k
Nitric Oxide Regulation of Inflammatory Responses and Gene ExpressionZIACL001158 · CLC · CLINICAL CENTER · PI DANNER, ROBERT L · 2009 to 2014
$0k
Functional Genomics of Inflammation and Critical IllnessZIACL001164 · CLC · CLINICAL CENTER · PI DANNER, ROBERT L · 2009 to 2018
$0k
Intramural NIH HHS
6 · The paper itself

Abstract

Nitric oxide (NO*) can stabilize mRNA by activating p38 mitogen-activated protein kinase (MAPK). Here, transcript stabilization by NO* was investigated in human THP-1 cells using microarrays. After LPS pre-stimulation, cells were treated with actinomycin D and then exposed to NO* without or with the p38 MAPK inhibitor SB202190 (SB). The decay of 220 mRNAs was affected; most were stabilized by NO*. Unexpectedly, SB often enhanced rather than antagonized transcript stability. NO* activated p38 MAPK and Erk1/2; SB blocked p38 MAPK, but further activated Erk1/2. RT-PCR confirmed that NO* and SB could additively stabilize certain mRNA transcripts, an effect abolished by Erk1/2 inhibition. In affected genes, these responses were associated with CU-rich elements (CURE) in 3'-untranslated regions (3'-UTR). NO* stabilized the mRNA of a CURE-containing reporter gene, while repressing translation. Dominant-negative Mek1, an Erk1/2 inhibitor, abolished this effect. NO* similarly stabilized, but blocked translation of MAP3K7IP2, a natural CURE-containing gene. NO* increased hnRNP translocation to the cytoplasm and binding to CURE. Over-expression of hnRNP K, like NO*, repressed translation of CURE-containing mRNA. These findings define a sequence-specific mechanism of NO*-triggered gene regulation that stabilizes mRNA, but represses translation.

Indexed as

Protein BiosynthesisRegulatory Sequences, Ribonucleic AcidRNA Stability3' Untranslated RegionsCell LineCytosineEnzyme ActivationExtracellular Signal-Regulated MAP KinasesGene Expression RegulationGenes, ReporterHeterogeneous-Nuclear RibonucleoproteinsHumansMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Nitric Oxidep38 Mitogen-Activated Protein Kinases3' Untranslated RegionsCytosineExtracellular Signal-Regulated MAP KinasesHeterogeneous-Nuclear RibonucleoproteinsMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Nitric Oxidep38 Mitogen-Activated Protein KinasesRegulatory Sequences, Ribonucleic AcidRNA, MessengerUracil

Identifiers

PMID16757573
PMCPMC1475749
OpenAlexW2042321273

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.