Evidence map›Paper›PMID 16757563›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Class II cytokine receptor gene cluster is a major locus for hepatitis B persistence.

Angela J Frodsham, Lyna Zhang, Uga Dumpis, Nor Azizah Mohd Taib, Steve Best, Andrew Durham, Branwen J W Hennig, Simon Hellier, Susanne Knapp, Mark Wright and 7 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 1 synthesis or guideline pooled it, 108 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
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  14. Review
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 3 countries.

Angela J FrodshamThe Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford OX3 7BN, United Kingdom.
Lyna Zhang
Uga Dumpis
Nor Azizah Mohd Taib
Steve Best
Andrew Durham
Branwen J W Hennig
Simon Hellier
Susanne Knapp
Mark Wright
Maria Chiaramonte
John I Bell
Mary Graves
Hilton C Whittle
Howard C Thomas
Mark R Thursz
Adrian V S Hill
St Mary's Hospital · GBCentre for Human Genetics · GBMRC Unit the Gambia · GMUniversity of Oxford · GBRoche (United Kingdom) · GBUniversity of L'Aquila · IT

Funding

Medical Research Council G0200250Wellcome Trust
6 · The paper itself

Abstract

Persistent hepatitis B virus infection is a major risk factor for hepatocellular carcinoma, the most frequent cancer in some developing countries. Up to 95% of those infected at birth and 15% of those infected after the neonatal period fail to clear hepatitis B virus, together resulting in approximately 350 million persistent carriers worldwide. Via a whole genome scan in Gambian families, we have identified a major susceptibility locus as a cluster of class II cytokine receptor genes on chromosome 21q22. Coding changes in two of these genes, the type I IFN receptor gene, IFN-AR2, and the IL-10RB gene that encodes a receptor chain for IL-10-related cytokines including the IFN-lambdas, are associated with viral clearance (haplotype P value = 0.0003), and in vitro assays support functional roles for these variants in receptor signaling.

Indexed as

Carrier StateHepatitis B, ChronicMultigene FamilyCarcinoma, HepatocellularCell LineGambiaGenetic MarkersGenetic Predisposition to DiseaseGenotypeHumansLinkage DisequilibriumLiver NeoplasmsMembrane ProteinsPolymorphism, GeneticReceptor, Interferon alpha-betaReceptors, CytokineGenetic MarkersMembrane ProteinsReceptor, Interferon alpha-betaReceptors, CytokineReceptors, InterferonReceptors, InterleukinReceptors, Interleukin-10Tumor Necrosis Factor-alpha

Identifiers

PMID16757563
PMCPMC1482581
OpenAlexW2005594962

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.