Evidence map›Paper›PMID 16755629›Full record

ArticleChembiochem : a European journal of chemical biology2006

scyllo-inositol pentakisphosphate as an analogue of myo-inositol 1,3,4,5,6-pentakisphosphate: chemical synthesis, physicochemistry and biological applications.

Andrew M Riley, Melanie Trusselle, Paul Kuad, Michal Borkovec, Jaiesoon Cho, Jae H Choi, Xun Qian, Stephen B Shears, Bernard Spiess, Barry V L Potter

Open access · greenAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

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  8. Simple synthesis ofPlant and soil · 2018
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  11. Review
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  14. Fibrinogen - a possible extracellular target for inositol phosphates.Messenger (Los Angeles, Calif. : Print) · 2012
    Article
  15. The behaviour of inositol 1,3,4,5,6-pentakisphosphate in the presence of the major biological metal cations.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2009
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Andrew M RileyWolfson Laboratory of Medicinal Chemistry, Department of Pharmacy and Pharmacology, University of Bath, UK.
Melanie Trusselle
Paul Kuad
Michal Borkovec
Jaiesoon Cho
Jae H Choi
Xun Qian
Stephen B Shears
Bernard Spiess
Barry V L Potter
National Institute of Environmental Health Sciences · USUniversity of Bath · GBCentre National de la Recherche Scientifique · FRUniversity of Geneva · CH

Funding

REGULATION OF INOSITOL LIPID SIGNALLING MECHANISMSZ01ES080046 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI SHEARS, STEPHEN B · 1990 to 2008
$4.3M
Intramural NIH HHS Z01 ES080046Wellcome TrustWellcome Trust 060554
6 · The paper itself

Abstract

myo-Inositol 1,3,4,5,6-pentakisphosphate (Ins(1,3,4,5,6)P(5)), an inositol polyphosphate of emerging significance in cellular signalling, and its C-2 epimer scyllo-inositol pentakisphosphate (scyllo-InsP(5)) were synthesised from the same myo-inositol-based precursor. Potentiometric and NMR titrations show that both pentakisphosphates undergo a conformational ring-flip at higher pH, beginning at pH 8 for scyllo-InsP(5) and pH 9 for Ins(1,3,4,5,6)P(5). Over the physiological pH range, however, the conformation of the inositol rings and the microprotonation patterns of the phosphate groups in Ins(1,3,4,5,6)P(5) and scyllo-InsP(5) are similar. Thus, scyllo-InsP(5) should be a useful tool for identifying biologically relevant actions of Ins(1,3,4,5,6)P(5), mediated by specific binding sites, and distinguishing them from nonspecific electrostatic effects. We also demonstrate that, although scyllo-InsP(5) and Ins(1,3,4,5,6)P(5) are both hydrolysed by multiple inositol polyphosphate phosphatase (MINPP), scyllo-InsP(5) is not dephosphorylated by PTEN or phosphorylated by Ins(1,3,4,5,6)P(5) 2-kinases. This finding both reinforces the value of scyllo-InsP(5) as a biological control and shows that the axial 2-OH group of Ins(1,3,4,5,6)P(5) plays a part in substrate recognition by PTEN and the Ins(1,3,4,5,6)P(5) 2-kinases.

Indexed as

Inositol PhosphatesMagnetic Resonance SpectroscopyMolecular ConformationPhosphoric Monoester HydrolasesPotentiometryProton-Motive ForcePTEN PhosphohydrolaseStatic ElectricityStructure-Activity RelationshipSubstrate Specificityinositol pentaphosphateInositol Phosphatesmultiple inositol-polyphosphate phosphatasePhosphoric Monoester HydrolasesPTEN PhosphohydrolasePTEN protein, humanscyllo-inositol pentakisphosphate

Identifiers

PMID16755629
PMCPMC1892220
OpenAlexW2037059979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.